Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0500 |
Symbol | |
ID | 5089813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 523678 |
End bp | 525141 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739899 |
Product | beta-lactamase |
Protein accession | YP_001192854 |
Protein GI | 146298263 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT CAATCAAACC AATTGCACTC TGCTTAATGC TTTTTCTTTT TACTGCAGGT ATTTTTGCCC AAAACAAAGC GCAGCAAATT GAACAGCTTT TAGCCAAATA TAACGAATAC GGACAATTTA ATGGTTCTGC CTTGGTAGCA GAAAATGGAA AAGTAATCTT AAAAAAAGGT TTTGGTCTGG CAAATATGGA ATGGAATATT CCCAACCAGC CCGATACAAA ATTTAGATTA GGTTCTATCA GTAAACAATT TACTGCGCTT TTAATTGTAA AACTTGCAGA AGAGGGAAAG CTTAAACTTG ATGTTCCTAT TACAACTTAT TTACCGGATT ATCCAAAAGA AAACGGCGAT AAAATAACGA TTCATAATCT GCTGACTCAT ACTTCAGGAA TTCCGAATTA TACAAGTGCT CCAAACTTTT TAAGAGACAA AGCAAAAAAT CCGTATACGC CTGCTGATTT TGTAAAAACG TTTGACAAAC TTCCTCTTGA ATTCAAACCT GGCGAAAAAT TTAATTACAG CAATTCAGGT TACTTTTTAC TTGGGTATAT TATCGAAAAA ATAACGGGTA AAACGTACGA ACAATATTTA CAGGAAACTA TTCTTACTCC TTTAAAAATG GTTAATTCCG GCTACGATCA CAGCGATGTA ATTTTAAAAA ACAGAGCTGC GGGTTATGAA AAAGAAGGGA AAAATTTTAG TAACGCATCA TACATCGATA TGAGTATTCC GTATGCGGCA GGTTCTTTAT ACTCTACCGT AGAAGATTTA TATATTTGGG ATCAGGCGCT TTATACCAAT AAACTGCTTT CAGAAAAATC AATGGAATCT TTATTTAAGC CTTACATAAA ATCATGGGGA GAAGAATCTT ATGGCTATGG ATGGTCTGTT AAAGAAATTA ATATTGGAGA AAAAAGCAAA ATTAAAGTAA TCGAACATGG CGGCGGTATT AACGGATTCA ACACGATCAT TTCGCGTATT CCTGCTGATA AAATTTTAGT GGTTTTATTA AACAATACCG GCGGAACAGT CTTAGGCGAG ATGAACAACG CAATCCGCAA TATTCTATAC AGTCAGCCTT TTAATCAGCC TAAAAAATCA TTAGCACTTG ATTTATTAGA CGTTTTTGAT ACAAAAGGAA CTGCAGCGGG CTTAGATACT TATAAAAAAT TGAAAAACGA TCCAACGTAT GCTATTAAAG AAGGCGATAT GAACCGAGTT GGATATCAAT TACTGCAAAC AGGAAAAAAG AAAGAAGCTA TCGAAGTTTT TAAAATCAAC GTAGAAGCTT TTCCAAAATC CGGAAATGTA TACGATAGTT TAGGCGAAGC TTATTTAGCC GACGGCGATA AAAAACTAGC TATTGCAAAC TACTCTAAAT CTGTTGAATT GGATCCTACA AACGAAGGCG GTAAAAAAGT ATTAGAAGAA CTTTCAAAAA GCAAAACAAA GTAA
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Protein sequence | MKQSIKPIAL CLMLFLFTAG IFAQNKAQQI EQLLAKYNEY GQFNGSALVA ENGKVILKKG FGLANMEWNI PNQPDTKFRL GSISKQFTAL LIVKLAEEGK LKLDVPITTY LPDYPKENGD KITIHNLLTH TSGIPNYTSA PNFLRDKAKN PYTPADFVKT FDKLPLEFKP GEKFNYSNSG YFLLGYIIEK ITGKTYEQYL QETILTPLKM VNSGYDHSDV ILKNRAAGYE KEGKNFSNAS YIDMSIPYAA GSLYSTVEDL YIWDQALYTN KLLSEKSMES LFKPYIKSWG EESYGYGWSV KEINIGEKSK IKVIEHGGGI NGFNTIISRI PADKILVVLL NNTGGTVLGE MNNAIRNILY SQPFNQPKKS LALDLLDVFD TKGTAAGLDT YKKLKNDPTY AIKEGDMNRV GYQLLQTGKK KEAIEVFKIN VEAFPKSGNV YDSLGEAYLA DGDKKLAIAN YSKSVELDPT NEGGKKVLEE LSKSKTK
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