Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0497 |
Symbol | |
ID | 5089810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 520570 |
End bp | 521361 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644739896 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001192851 |
Protein GI | 146298260 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.516029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAT ACTTAGAACA TTACGTAACT CAAAAAACTG AAAGGTTCAT CAATAAAATA TGGTGTCTGG ATAACAGCAT CGGCGAAAGC CTGATCGAAA ATAAACTCGT TTTACCTAAC GGCTGTTTCA ATCTAGCGAT TGTAACTGGA AAAGCGATAG AAGTTCATAC GAGTAAAAAC AAATATGAAA TGAACGAAGG TGTTTATTTT TGTTCACAAA TGACCAATAA AGTTTTGGTT AATATTGAGC CGAAAACCAA AGTCACTATA ATTCAGTTTC ATACCTGGAC ACTTTCGATG TTTCCAAAAT ACGATTTAAG CAATTTTACA GATTCAATTA TCAAAATTAA TCCTGAAGAA CTGCCTTTTA ATCTTCAAAT TGATTCAGAC ATTGAACGTT TATTACAAAC AATAAATGTT TATTTTGAAG AATTATCAGA TTTACATTCA GAGAAAAACA CAATCGAAAA AATCTGTGAG ATCATTAAAA ATCAAGAAGA AATTTCGGTT GCAGACATCA GCAAGAATTT AAAATTATCC CAAAGACTGC TTCAAATTAA ATTTAAAACA GCAACCGGAT TGACAATTAA AAAATACATT CAGATTTTAA AATTCAGAAA AGCGGTCGAT CAAATGGTGA ATGCTGATTT AGAAAAGCTA AAATTAACCG ATGTTGCGCT TTACAATAAA TACTTTGATC AGTCGCATTT TATAAAAAAA TTCAAAGATG TGATGAAAAC TACACCGAAA ACATTCGATC CTGATTCGTA TTTTCTCTCA CTTAAAAGAT AA
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Protein sequence | MNLYLEHYVT QKTERFINKI WCLDNSIGES LIENKLVLPN GCFNLAIVTG KAIEVHTSKN KYEMNEGVYF CSQMTNKVLV NIEPKTKVTI IQFHTWTLSM FPKYDLSNFT DSIIKINPEE LPFNLQIDSD IERLLQTINV YFEELSDLHS EKNTIEKICE IIKNQEEISV ADISKNLKLS QRLLQIKFKT ATGLTIKKYI QILKFRKAVD QMVNADLEKL KLTDVALYNK YFDQSHFIKK FKDVMKTTPK TFDPDSYFLS LKR
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