Gene Fjoh_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0472 
Symbol 
ID5089986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp489305 
End bp491728 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content33% 
IMG OID644739867 
Producthypothetical protein 
Protein accessionYP_001192827 
Protein GI146298236 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA ACTGGATCAA CATATTTATT TATCACATCA AAAACAATAA GCTTTTTACA 
GCTTTAAATG TTTTAGGTTT GAGTATTGGA ATCGCAGGTT TAATTTTTGC GATTTTATAT
TGGAACGACG AACAAAGTTA CGATCAATGG AACCCTAATA AAGACAATAT CTTTTTAGTC
GCCAACCAAA TGGACGCGAC TACATACTGG GCATCAAGTT CGGCACCAAT AGGACCTGCC
ATAAAAGAGA TAAATCCTGA AGTAGCATCT TACTGCTATT TGAGTGGTGA TTACGACAAT
GAAATCATTC GTTTTAATAA CAAAAAAGTA CAGTCAGATA AAATAATTGC AGCGCAAAAA
AATTTCTTTG AGTATTTCCC TTATTCATTT ATCGAAGGAA ATTCAAAAAC CGCATTACCA
GATATAAACA GTATTTGTTT ATCTCAAGAT TTGGCGGCTC AGCTTTTTGG AAACGAAACT
GCTTTGGGAA AACAAGTTGT GCTGAAAGGT AAAAACCTAA TCGTAACAGG TGTTTACAAA
CTCGATAAAA AATCAGCTTA TAACCCGTCC TGCGTGGTTA ACTTTATGGA TGAACGATTA
AAAGGAAACG CTCAGGCCTG GGGTGATTTT CAATTTGTGC TGTTATTAAA ACTAAAAAAT
CCGAGTGAGC AAAAACGAGT GACTCAAAAT CTTCAAAAAA TATATTTTGA GAATATGACA
TCTCGTTATG CTAAAAATCA AGGTATTTCA CCAGAAGAAT TTATTAAGAA ATATGGCGAA
GTAAAACCAT GTTTAGAATC GTTGTCGTCT ATTCGCCTTC ATACCAAAAC CGGCGGTTTG
GCAGAACCTA AAGGTAATTA TCAATTTCTG CTTATCATGG TTGGGTTATC GGTTTTAATT
CTAATCTTAT CAATTGTAAA TTATGTCAAT TCGGCTACGG CAAATGCTGT AAAAAGAGCC
AAAGAAGTTG GAGTGCGCAA AATTATCGGC GCTTCAAAAA CAGCTATTGT CAAACAATTT
ATTTTTGAAA CCGCAGTAAT CGCTTTGCTT TCCATTTTAA TATCGCTAGT TATTGTAGAA
CTTTCTCTGC CTTATTACAA TGCTTTTTTA GAAAAATCTC TTGCATTGCA AAGCAGTCAG
TTTTATTTAC AGCTTGTCGT TATATTCGTT ATTACTGTAA TACTGGCAGG GATATTTCCG
GCTGTTTATG TTTCTAATTT TGAATCGCTA AAAGTATTGA AGGGGAATTT TGGCAGAAGC
AAAAGCGGTG TCTGGCTTAG AAACGGTATG CTTATTTTTC AATTTGCAGT AGCTGCCTTC
TTTATTGTTG GATCTTATGT TGTATACGAA CAAATAGATC TTATGAACTC GAAAGATTTG
GGTTTTAACG GCAAACAGAT TCTTAATATT TCATACCGAA ATATCTATGG CGAAGGAATA
ACTAATAAAG ACCGTTTTGA ACGATACACT ATTATTAAAA ACCAATTGCA GCATATAAAA
GGAGTTCAGC AGGTTTCGAG CGCTGGTTTT GTTTTAGGAA ATGGAGCAAG ATCTGTAATT
TCTTATCACT ATAAAGATCT AAATATTGAC GGCAGTAATA TGCCAATCGA TTTTGGACTG
CTGGAAATGA TGAAAATTAA AATTGTAAAA GGACGTTCTT TCAATCCAGA ATTTGCTCAG
GATACCATTT CTTCAATGTT AATTAATGAA ACAGCTCTAA AATTATTAAA TGAAAAAGAT
CCGATAGGCA AAAAAGTACA CTGGAACGGA CTAGATGCCA TTATTGTTGG AGTTGTAAAA
GATTTTAATG TAGGTAACCC TGGAGAACCA ATTCCTCCAA TGTCATTTTT TCATTTTAAA
ACTGTGCCTT GGTTTACAGC AAACTTAAAT AATATTTACA TCACTGCCGA TCCTAAAACT
ATGCAGCAAA CTATAGCTGG TATAGAAAAT CTTTGGATCA AAAAAGTAGA TCCGGATTAT
CCATTTGTAT ACGATTTTGT TGATAAACAA TACAAAAGAT CATTCAGCAG TTATGTAAAA
CAAAAAAATC TTTTTTCTTT ATTGAATATC ATTGTTATCA CAATTGCGCT TTTAGGATTA
TTTGCTCTTG CATCTTATTC TATAGAAAGA CGAATGAAAG AAATCGCAAT TCGAAAAACA
CTGGGTGCAG AAACCAATGT ATTACTAAAG GAACTCTGTA AACAATATAT TCTTTTTAGC
GTAGTTGGTT TTTTAATTGC TTTATTTCCC GCTTATTATC TGCTAAATAA ATGGCTTGAA
AATTTCTCGT ACAGAATTAC CATTTCTATT TATCCGTTTT TAATTGGATT TACAGCTTTG
TTGATTTTGA CTTTATTGGT AGTTCTTTCC AGAGCGTATC AGGCAACTAA AGTTGATGTT
TTGAAATATC TTAAATATGA ATAA
 
Protein sequence
MLKNWINIFI YHIKNNKLFT ALNVLGLSIG IAGLIFAILY WNDEQSYDQW NPNKDNIFLV 
ANQMDATTYW ASSSAPIGPA IKEINPEVAS YCYLSGDYDN EIIRFNNKKV QSDKIIAAQK
NFFEYFPYSF IEGNSKTALP DINSICLSQD LAAQLFGNET ALGKQVVLKG KNLIVTGVYK
LDKKSAYNPS CVVNFMDERL KGNAQAWGDF QFVLLLKLKN PSEQKRVTQN LQKIYFENMT
SRYAKNQGIS PEEFIKKYGE VKPCLESLSS IRLHTKTGGL AEPKGNYQFL LIMVGLSVLI
LILSIVNYVN SATANAVKRA KEVGVRKIIG ASKTAIVKQF IFETAVIALL SILISLVIVE
LSLPYYNAFL EKSLALQSSQ FYLQLVVIFV ITVILAGIFP AVYVSNFESL KVLKGNFGRS
KSGVWLRNGM LIFQFAVAAF FIVGSYVVYE QIDLMNSKDL GFNGKQILNI SYRNIYGEGI
TNKDRFERYT IIKNQLQHIK GVQQVSSAGF VLGNGARSVI SYHYKDLNID GSNMPIDFGL
LEMMKIKIVK GRSFNPEFAQ DTISSMLINE TALKLLNEKD PIGKKVHWNG LDAIIVGVVK
DFNVGNPGEP IPPMSFFHFK TVPWFTANLN NIYITADPKT MQQTIAGIEN LWIKKVDPDY
PFVYDFVDKQ YKRSFSSYVK QKNLFSLLNI IVITIALLGL FALASYSIER RMKEIAIRKT
LGAETNVLLK ELCKQYILFS VVGFLIALFP AYYLLNKWLE NFSYRITISI YPFLIGFTAL
LILTLLVVLS RAYQATKVDV LKYLKYE