Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0472 |
Symbol | |
ID | 5089986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 489305 |
End bp | 491728 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644739867 |
Product | hypothetical protein |
Protein accession | YP_001192827 |
Protein GI | 146298236 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAA ACTGGATCAA CATATTTATT TATCACATCA AAAACAATAA GCTTTTTACA GCTTTAAATG TTTTAGGTTT GAGTATTGGA ATCGCAGGTT TAATTTTTGC GATTTTATAT TGGAACGACG AACAAAGTTA CGATCAATGG AACCCTAATA AAGACAATAT CTTTTTAGTC GCCAACCAAA TGGACGCGAC TACATACTGG GCATCAAGTT CGGCACCAAT AGGACCTGCC ATAAAAGAGA TAAATCCTGA AGTAGCATCT TACTGCTATT TGAGTGGTGA TTACGACAAT GAAATCATTC GTTTTAATAA CAAAAAAGTA CAGTCAGATA AAATAATTGC AGCGCAAAAA AATTTCTTTG AGTATTTCCC TTATTCATTT ATCGAAGGAA ATTCAAAAAC CGCATTACCA GATATAAACA GTATTTGTTT ATCTCAAGAT TTGGCGGCTC AGCTTTTTGG AAACGAAACT GCTTTGGGAA AACAAGTTGT GCTGAAAGGT AAAAACCTAA TCGTAACAGG TGTTTACAAA CTCGATAAAA AATCAGCTTA TAACCCGTCC TGCGTGGTTA ACTTTATGGA TGAACGATTA AAAGGAAACG CTCAGGCCTG GGGTGATTTT CAATTTGTGC TGTTATTAAA ACTAAAAAAT CCGAGTGAGC AAAAACGAGT GACTCAAAAT CTTCAAAAAA TATATTTTGA GAATATGACA TCTCGTTATG CTAAAAATCA AGGTATTTCA CCAGAAGAAT TTATTAAGAA ATATGGCGAA GTAAAACCAT GTTTAGAATC GTTGTCGTCT ATTCGCCTTC ATACCAAAAC CGGCGGTTTG GCAGAACCTA AAGGTAATTA TCAATTTCTG CTTATCATGG TTGGGTTATC GGTTTTAATT CTAATCTTAT CAATTGTAAA TTATGTCAAT TCGGCTACGG CAAATGCTGT AAAAAGAGCC AAAGAAGTTG GAGTGCGCAA AATTATCGGC GCTTCAAAAA CAGCTATTGT CAAACAATTT ATTTTTGAAA CCGCAGTAAT CGCTTTGCTT TCCATTTTAA TATCGCTAGT TATTGTAGAA CTTTCTCTGC CTTATTACAA TGCTTTTTTA GAAAAATCTC TTGCATTGCA AAGCAGTCAG TTTTATTTAC AGCTTGTCGT TATATTCGTT ATTACTGTAA TACTGGCAGG GATATTTCCG GCTGTTTATG TTTCTAATTT TGAATCGCTA AAAGTATTGA AGGGGAATTT TGGCAGAAGC AAAAGCGGTG TCTGGCTTAG AAACGGTATG CTTATTTTTC AATTTGCAGT AGCTGCCTTC TTTATTGTTG GATCTTATGT TGTATACGAA CAAATAGATC TTATGAACTC GAAAGATTTG GGTTTTAACG GCAAACAGAT TCTTAATATT TCATACCGAA ATATCTATGG CGAAGGAATA ACTAATAAAG ACCGTTTTGA ACGATACACT ATTATTAAAA ACCAATTGCA GCATATAAAA GGAGTTCAGC AGGTTTCGAG CGCTGGTTTT GTTTTAGGAA ATGGAGCAAG ATCTGTAATT TCTTATCACT ATAAAGATCT AAATATTGAC GGCAGTAATA TGCCAATCGA TTTTGGACTG CTGGAAATGA TGAAAATTAA AATTGTAAAA GGACGTTCTT TCAATCCAGA ATTTGCTCAG GATACCATTT CTTCAATGTT AATTAATGAA ACAGCTCTAA AATTATTAAA TGAAAAAGAT CCGATAGGCA AAAAAGTACA CTGGAACGGA CTAGATGCCA TTATTGTTGG AGTTGTAAAA GATTTTAATG TAGGTAACCC TGGAGAACCA ATTCCTCCAA TGTCATTTTT TCATTTTAAA ACTGTGCCTT GGTTTACAGC AAACTTAAAT AATATTTACA TCACTGCCGA TCCTAAAACT ATGCAGCAAA CTATAGCTGG TATAGAAAAT CTTTGGATCA AAAAAGTAGA TCCGGATTAT CCATTTGTAT ACGATTTTGT TGATAAACAA TACAAAAGAT CATTCAGCAG TTATGTAAAA CAAAAAAATC TTTTTTCTTT ATTGAATATC ATTGTTATCA CAATTGCGCT TTTAGGATTA TTTGCTCTTG CATCTTATTC TATAGAAAGA CGAATGAAAG AAATCGCAAT TCGAAAAACA CTGGGTGCAG AAACCAATGT ATTACTAAAG GAACTCTGTA AACAATATAT TCTTTTTAGC GTAGTTGGTT TTTTAATTGC TTTATTTCCC GCTTATTATC TGCTAAATAA ATGGCTTGAA AATTTCTCGT ACAGAATTAC CATTTCTATT TATCCGTTTT TAATTGGATT TACAGCTTTG TTGATTTTGA CTTTATTGGT AGTTCTTTCC AGAGCGTATC AGGCAACTAA AGTTGATGTT TTGAAATATC TTAAATATGA ATAA
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Protein sequence | MLKNWINIFI YHIKNNKLFT ALNVLGLSIG IAGLIFAILY WNDEQSYDQW NPNKDNIFLV ANQMDATTYW ASSSAPIGPA IKEINPEVAS YCYLSGDYDN EIIRFNNKKV QSDKIIAAQK NFFEYFPYSF IEGNSKTALP DINSICLSQD LAAQLFGNET ALGKQVVLKG KNLIVTGVYK LDKKSAYNPS CVVNFMDERL KGNAQAWGDF QFVLLLKLKN PSEQKRVTQN LQKIYFENMT SRYAKNQGIS PEEFIKKYGE VKPCLESLSS IRLHTKTGGL AEPKGNYQFL LIMVGLSVLI LILSIVNYVN SATANAVKRA KEVGVRKIIG ASKTAIVKQF IFETAVIALL SILISLVIVE LSLPYYNAFL EKSLALQSSQ FYLQLVVIFV ITVILAGIFP AVYVSNFESL KVLKGNFGRS KSGVWLRNGM LIFQFAVAAF FIVGSYVVYE QIDLMNSKDL GFNGKQILNI SYRNIYGEGI TNKDRFERYT IIKNQLQHIK GVQQVSSAGF VLGNGARSVI SYHYKDLNID GSNMPIDFGL LEMMKIKIVK GRSFNPEFAQ DTISSMLINE TALKLLNEKD PIGKKVHWNG LDAIIVGVVK DFNVGNPGEP IPPMSFFHFK TVPWFTANLN NIYITADPKT MQQTIAGIEN LWIKKVDPDY PFVYDFVDKQ YKRSFSSYVK QKNLFSLLNI IVITIALLGL FALASYSIER RMKEIAIRKT LGAETNVLLK ELCKQYILFS VVGFLIALFP AYYLLNKWLE NFSYRITISI YPFLIGFTAL LILTLLVVLS RAYQATKVDV LKYLKYE
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