Gene Fjoh_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0448 
Symbol 
ID5089962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp466351 
End bp467199 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content35% 
IMG OID644739842 
Productglycosyl transferase family protein 
Protein accessionYP_001192803 
Protein GI146298212 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0726747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT ACATCGTCAT TCCCGCTCAT AACGAACAAG ATTTAATTGG CCTGACTTTA 
CAATCTCTGG TTACTCAAAC TGTTCTGCCT GCAAAAGTTG TAGTTGTAAA CGACAATTCG
ACAGATAAAA CGGAAGAAGT TGTATTAAGT TTTGCAAAAG ATAATCCGTA TATTTCTGTT
GTAAACAAAA CTTCAGATGC GATTCATTTA CCGGGAAGCA AAGTAATACA AGCTTTCCAG
AAAGGTTTTG AAACTCTGGG TTCTGATTAC GATATTATTG TAAAAATAGA CGGCGACTTA
ATTTTCCCGC CAAACTATTT TGAAACTATA ATCAAACATT TCGAATCTGA TCCAAAAATT
GGAATGGCCG GCGGATTCTG CTATATTGAT AAAAACGGCG AATGGGTTTT AGAAAACCTT
ACGGATAAAG ACCATATTCG CGGAGCTTTA AAAGCGTACC GAAAAGAGAC TTTCCAGCAA
ATTGAAGGTT TACGACCAGC AATGGGCTGG GACACTGTAG ATGAATTACT TTGTAAATAT
TACGATTGGA AAATTGTTAC CGATGAATCT TTACATGTAA AACATCTAAA ACCAACTGGT
GCAAATTACA ACAAAACTGC CCGCTACAAA CAAGGCGAAG CTTTTTATAC TTTAGGTTAT
GGTTTTTGGA TTACTGCAAT TGCTTCGGCA AAACTGGCAA TGATGAAGAA AAAGCCGTTT
CTCTTTTTAG ATTATATCAA AGGTTTTTTG AAGGCCAAAA AAGCAAAAAC TCCTTTATTA
GTTACCCCTG AACAAGCTAA ATTTATTAGA AATTATCGTT TAAAAAAGAT GAAAGAAAAG
CTTTTTTAA
 
Protein sequence
MKYYIVIPAH NEQDLIGLTL QSLVTQTVLP AKVVVVNDNS TDKTEEVVLS FAKDNPYISV 
VNKTSDAIHL PGSKVIQAFQ KGFETLGSDY DIIVKIDGDL IFPPNYFETI IKHFESDPKI
GMAGGFCYID KNGEWVLENL TDKDHIRGAL KAYRKETFQQ IEGLRPAMGW DTVDELLCKY
YDWKIVTDES LHVKHLKPTG ANYNKTARYK QGEAFYTLGY GFWITAIASA KLAMMKKKPF
LFLDYIKGFL KAKKAKTPLL VTPEQAKFIR NYRLKKMKEK LF