| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0422 |
|---|
| Symbol | |
|---|
| ID | 5093305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 440902 |
|---|
| End bp | 442173 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644739816 |
|---|
| Product | glucose/sorbosone dehydrogenase-like protein |
|---|
| Protein accession | YP_001192777 |
|---|
| Protein GI | 146298186 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CCTTAACCTT ATTTTCAATA CCACTATTGG CATTAATGAC TGCCTGCAAC
GGGCAGGTGA AAAAAGAAGA AAAAGAAGCT TTAGCAAAAC AGCTGGGCAA TGTTGTAAAA
ACTGCCGTTG GAGACATTAC GCTTCCTCCT CCCTATGCAA CCGAATCTAA AACAAACAAC
AGCAAAGTTA TTGGCTGGCC AAAAGATAAA ACTCCTAAAG CGCCGGAAGG TTTTACAGTA
ACAAAATTTG CAGATGGATT CGAAAATCCG CGTTGGACTT ATATTGCTCC TAATCAGGAT
ATTTTTGTAG TAGAAAGCGG AACAAGAACC AGTAAAAATC AAATTACGGT TTTGCGCGAT
AAAGACAAAG ATGGAAAATT TGAAACTCGT GAGGTTTTTA TTTCTGGTTT AAACAAACCT
TTTGGAATGC TGGTTTTAAA AGACTTTTTC TACATCGCAA ATACTGACGG ATTATACCGT
TATCCTTATA AAAACAATCC GCTGAAATTA GAAACAAAAG GCGAAAAAAT ACTTGAACTT
CCAGCCGGAG GTTACAACAA TCACTGGACG CGAAATTTAT TAGCAAGTCC GGACGGAAGC
AAAATTTATG TTTCTGTAGG TTCAGGAAGT AATAATGCTG AACATGGTGT AGACAAAGAA
GTTCGCCGAG CCGGAATTTT GGAAATTAAT CCTGATGGAA CTGGTGAAAA AATCTACGCT
TCGGGACTTC GAAATCCGGT TGGAATGGAC TGGAATCCTG TTAATAAAGA ACTTTGGACT
GCGGTAAACG AACGTGATGA ATTAGGCGAT GACTTGGTTC CGGATTATAT TACAAGCGTA
AAAAGAGATG GTTTCTATGG CTGGCCTTAT TCTTATTTTG GAAGTATTCC TGATCCAAGA
ATGAAAGGCG AAAGAAAAGA TTTAGTTGAA AAAGCAATTG TTCCGGATGT TCCGGTTGGT
GCTCACACAG CTTCATTAGG ATTGGCTTTT TACACAAAAG ATGCTTTTCC TGCAAAATAT
AAAAATGGTG TTTTCGTTGG ACAGCACGGA TCTTGGAACC GCTCTAAAAT TTCGGGTTAC
AAAGTTTTAT TCGTTCCTTT TAAAGATGGA AAACCTTCGG AAAAACCAGA AGATTTTTTA
ACAGGTTTTA TTTCTGATGA AAATAAGGCA GAAGTTTACG GGCGTCCGGT TGCCGTGACG
GTTATGAACG ATGGTTCGCT TTTAGTAAAT GACGACAGCA GTAACACAAT TTGGAAAGTG
ACAGCCAAAT AA
|
|---|
| Protein sequence | MKKSLTLFSI PLLALMTACN GQVKKEEKEA LAKQLGNVVK TAVGDITLPP PYATESKTNN
SKVIGWPKDK TPKAPEGFTV TKFADGFENP RWTYIAPNQD IFVVESGTRT SKNQITVLRD
KDKDGKFETR EVFISGLNKP FGMLVLKDFF YIANTDGLYR YPYKNNPLKL ETKGEKILEL
PAGGYNNHWT RNLLASPDGS KIYVSVGSGS NNAEHGVDKE VRRAGILEIN PDGTGEKIYA
SGLRNPVGMD WNPVNKELWT AVNERDELGD DLVPDYITSV KRDGFYGWPY SYFGSIPDPR
MKGERKDLVE KAIVPDVPVG AHTASLGLAF YTKDAFPAKY KNGVFVGQHG SWNRSKISGY
KVLFVPFKDG KPSEKPEDFL TGFISDENKA EVYGRPVAVT VMNDGSLLVN DDSSNTIWKV
TAK
|
|---|
| |