Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0413 |
Symbol | |
ID | 5093296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 425079 |
End bp | 425768 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739807 |
Product | DNA repair protein RadC |
Protein accession | YP_001192768 |
Protein GI | 146298177 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.319313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAA GTCATTTTGC TATAAAAGAT TGGTCAGAAG ATGATAAGCC TCGCGAAAAA TTAATGCTTA AGGGCAAAGA GGCTCTGAGT GATGCTGAAT TAATGGCTAT TTTAATTGGT TCTGGAAGTC GTAACGAATC TGCTGTTGCA TTAAGCCAGC GGATTTTAGC TTCTGCTAAA AATTTAAACT CTTTATGGAA AATGTCTGTT TCGCAGTTAA TAAAGTTTAA AGGAATAGGA GAGGCCAAAG CAGTTTCAAT TGTTGCTGCA TTAGAATTAG GCAGAAGACA GAGAGCGGAA GATATATTGA AGTTAAAAAA AATAACTTCG AGTAAAGATG CCTTTACTAT TATGCAGCCA ATTATTGGCG AACTTCCTCA CGAAGAATTT TGGGTGCTTT TTCTTAATAA TTCAAATAAG GTAATTTCTA AAGCACAATT GAGTAAAGGA GGAATTGCCG GAACAATTGT AGATGTGCGG TTGGTTTTTA AATTGGGATT AGAAAATGGC GCTACTGGTT TGATTTTGTG CCATAATCAT CCTTCTGGAG AGTTAAATCC AAGTCAGGCT GATAAACAGA TTACTAAGAA AATAAAAACG GCAGGAGAGA TATTAGATGT TAAAATTTTA GACCATTTGA TTATAACTGA AACAAAATAT TATAGTTTTG TAGATGAAGG AATTTTCTAA
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Protein sequence | MEGSHFAIKD WSEDDKPREK LMLKGKEALS DAELMAILIG SGSRNESAVA LSQRILASAK NLNSLWKMSV SQLIKFKGIG EAKAVSIVAA LELGRRQRAE DILKLKKITS SKDAFTIMQP IIGELPHEEF WVLFLNNSNK VISKAQLSKG GIAGTIVDVR LVFKLGLENG ATGLILCHNH PSGELNPSQA DKQITKKIKT AGEILDVKIL DHLIITETKY YSFVDEGIF
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