Gene Fjoh_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0413 
Symbol 
ID5093296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp425079 
End bp425768 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content34% 
IMG OID644739807 
ProductDNA repair protein RadC 
Protein accessionYP_001192768 
Protein GI146298177 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.319313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA GTCATTTTGC TATAAAAGAT TGGTCAGAAG ATGATAAGCC TCGCGAAAAA 
TTAATGCTTA AGGGCAAAGA GGCTCTGAGT GATGCTGAAT TAATGGCTAT TTTAATTGGT
TCTGGAAGTC GTAACGAATC TGCTGTTGCA TTAAGCCAGC GGATTTTAGC TTCTGCTAAA
AATTTAAACT CTTTATGGAA AATGTCTGTT TCGCAGTTAA TAAAGTTTAA AGGAATAGGA
GAGGCCAAAG CAGTTTCAAT TGTTGCTGCA TTAGAATTAG GCAGAAGACA GAGAGCGGAA
GATATATTGA AGTTAAAAAA AATAACTTCG AGTAAAGATG CCTTTACTAT TATGCAGCCA
ATTATTGGCG AACTTCCTCA CGAAGAATTT TGGGTGCTTT TTCTTAATAA TTCAAATAAG
GTAATTTCTA AAGCACAATT GAGTAAAGGA GGAATTGCCG GAACAATTGT AGATGTGCGG
TTGGTTTTTA AATTGGGATT AGAAAATGGC GCTACTGGTT TGATTTTGTG CCATAATCAT
CCTTCTGGAG AGTTAAATCC AAGTCAGGCT GATAAACAGA TTACTAAGAA AATAAAAACG
GCAGGAGAGA TATTAGATGT TAAAATTTTA GACCATTTGA TTATAACTGA AACAAAATAT
TATAGTTTTG TAGATGAAGG AATTTTCTAA
 
Protein sequence
MEGSHFAIKD WSEDDKPREK LMLKGKEALS DAELMAILIG SGSRNESAVA LSQRILASAK 
NLNSLWKMSV SQLIKFKGIG EAKAVSIVAA LELGRRQRAE DILKLKKITS SKDAFTIMQP
IIGELPHEEF WVLFLNNSNK VISKAQLSKG GIAGTIVDVR LVFKLGLENG ATGLILCHNH
PSGELNPSQA DKQITKKIKT AGEILDVKIL DHLIITETKY YSFVDEGIF