Gene Fjoh_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0406 
Symbol 
ID5093289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp419281 
End bp420015 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content34% 
IMG OID644739800 
ProductRNA methyltransferase 
Protein accessionYP_001192761 
Protein GI146298170 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0940631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG AACATCAAAT ATTTGGCATT AGAGCCATTA TAGAAGCAAT ACAAGCAGGT 
CAGGAAGTCG ACAAAGTATT TATACAAAAA GAGATTTCTG GAGAGTTAAT GAAAGATTTG
ATGAAGGTAA TGAAACGTGC CAACATCAAT TTCTCTTATG TTCCTGTTGA AAAATTAAAT
CGGTTAACAC CAAACAACCA CCAGGGTGCT GTTGCTACAA TTTCACCAAT TGGTTTTATC
GATATAGAAC ATCTTGTTGA ATCAACTATT GCTTCGGGTT CAAAACCTCT TTTTTTAATT
TTAGATCAAA TCTCTGATGC CCGAAATTTT GGTGCTATAA TCAGAACTGC AGAATGTACT
GGTGTTAATG GCATCATTGT TCAAAAAGCA GGTTCAGCGC CGGTAAATGG TGACACTGTT
AAAACTTCAG CAGGAGCTGT TTTTAATGTG CCAATCTGTA AGGTTGAACA TATTAAAGAT
GCTATTTTTT ATTTACAGGG TTCGGGAATT AAAACAGTAG CAGCAACTGA AAAAACAGAT
CAAAATATTT ATGACTTATC ATTAAATGAA CCATTAGCTA TTATAATGGG ATCTGAAGAT
CGAGGAATAA ATCCTTCTGT TCTTAAAATC GTAGATGAAA AAGCTAAATT ACCAATGTTT
GGATCTATAG GATCATTAAA TGTATCTGTT GCCTGTGGGG CATTTTTATA CGAAGCTGTC
CGTCAAAGAA GTTAA
 
Protein sequence
MEKEHQIFGI RAIIEAIQAG QEVDKVFIQK EISGELMKDL MKVMKRANIN FSYVPVEKLN 
RLTPNNHQGA VATISPIGFI DIEHLVESTI ASGSKPLFLI LDQISDARNF GAIIRTAECT
GVNGIIVQKA GSAPVNGDTV KTSAGAVFNV PICKVEHIKD AIFYLQGSGI KTVAATEKTD
QNIYDLSLNE PLAIIMGSED RGINPSVLKI VDEKAKLPMF GSIGSLNVSV ACGAFLYEAV
RQRS