Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0406 |
Symbol | |
ID | 5093289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 419281 |
End bp | 420015 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739800 |
Product | RNA methyltransferase |
Protein accession | YP_001192761 |
Protein GI | 146298170 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0940631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAG AACATCAAAT ATTTGGCATT AGAGCCATTA TAGAAGCAAT ACAAGCAGGT CAGGAAGTCG ACAAAGTATT TATACAAAAA GAGATTTCTG GAGAGTTAAT GAAAGATTTG ATGAAGGTAA TGAAACGTGC CAACATCAAT TTCTCTTATG TTCCTGTTGA AAAATTAAAT CGGTTAACAC CAAACAACCA CCAGGGTGCT GTTGCTACAA TTTCACCAAT TGGTTTTATC GATATAGAAC ATCTTGTTGA ATCAACTATT GCTTCGGGTT CAAAACCTCT TTTTTTAATT TTAGATCAAA TCTCTGATGC CCGAAATTTT GGTGCTATAA TCAGAACTGC AGAATGTACT GGTGTTAATG GCATCATTGT TCAAAAAGCA GGTTCAGCGC CGGTAAATGG TGACACTGTT AAAACTTCAG CAGGAGCTGT TTTTAATGTG CCAATCTGTA AGGTTGAACA TATTAAAGAT GCTATTTTTT ATTTACAGGG TTCGGGAATT AAAACAGTAG CAGCAACTGA AAAAACAGAT CAAAATATTT ATGACTTATC ATTAAATGAA CCATTAGCTA TTATAATGGG ATCTGAAGAT CGAGGAATAA ATCCTTCTGT TCTTAAAATC GTAGATGAAA AAGCTAAATT ACCAATGTTT GGATCTATAG GATCATTAAA TGTATCTGTT GCCTGTGGGG CATTTTTATA CGAAGCTGTC CGTCAAAGAA GTTAA
|
Protein sequence | MEKEHQIFGI RAIIEAIQAG QEVDKVFIQK EISGELMKDL MKVMKRANIN FSYVPVEKLN RLTPNNHQGA VATISPIGFI DIEHLVESTI ASGSKPLFLI LDQISDARNF GAIIRTAECT GVNGIIVQKA GSAPVNGDTV KTSAGAVFNV PICKVEHIKD AIFYLQGSGI KTVAATEKTD QNIYDLSLNE PLAIIMGSED RGINPSVLKI VDEKAKLPMF GSIGSLNVSV ACGAFLYEAV RQRS
|
| |