Gene Fjoh_0397 details

Gene Information

• Locus tag: Fjoh_0397
• Symbol: rplC
• ID: 5093280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 406875
• End bp: 407492
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 644739791
• Product: 50S ribosomal protein L3
• Protein accession: YP_001192752
• Protein GI: 146298161
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGGGT TAATTGGTAA AAAAATCGGC ATGACTAGTA TTTTCGACGA AAACGGGAAA 
AACATTCCTT GTACAGTAAT CGAAGCTGGA CCATGTGTTG TTACCCAAGT CAGAACCAAC 
GAGGTTGACG GGTATGAAGC GTTGCAACTT GGTTTCGATG ACAAAAACGA GAAACATTCT 
ACTAAAGCTG CTTTAGGGCA CTTTAAAAAA GCTGGAACTG TTGCTAAGAA AAAAGTCGTT 
GAATTCCAAG ATTTTGCAAC TGAGCAAAAA TTAGGAGATC TTATTGATGT TTCTATTTTT 
GAAGAAGGAG AGTTTGTAGA CGTGCAAGGT GTGTCTAAAG GTAAAGGTTT CCAAGGTGTT 
GTTAAACGTC ACGGTTTTGG TGGGGTTGGG CAAGCTACAC ATGGTCAGCA CAACCGTTTA 
AGAGCGCCAG GTTCTGTAGG AGCATCTTCT TATCCGTCTA GAGTATTCAA AGGAATGCGT 
ATGGCTGGAA GAATGGGAGG AGATAATGTA AAAGTTCAAA ACCTTAGAGT TTTAAAAGTA 
GTTGCTGAAA AGAATCTACT TGTTGTTAAA GGATGTATTC CAGGACACAA AAACTCTTAC 
GTAATCATTC AGAAGTAA 

 

Protein sequence

MSGLIGKKIG MTSIFDENGK NIPCTVIEAG PCVVTQVRTN EVDGYEALQL GFDDKNEKHS 
TKAALGHFKK AGTVAKKKVV EFQDFATEQK LGDLIDVSIF EEGEFVDVQG VSKGKGFQGV 
VKRHGFGGVG QATHGQHNRL RAPGSVGASS YPSRVFKGMR MAGRMGGDNV KVQNLRVLKV 
VAEKNLLVVK GCIPGHKNSY VIIQK