Gene Fjoh_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0380 
SymbolrpsE 
ID5093263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp399265 
End bp399786 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content36% 
IMG OID644739774 
Product30S ribosomal protein S5 
Protein accessionYP_001192735 
Protein GI146298144 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT ACAAAAATGT AGAATTGGTA AAACCTAGTG GTCTTGAACT TAAAGATCGT 
CTAGTTAGTG TAAATCGTGT TACTAAAGTT ACAAAAGGAG GTAGAGCTTT TGGTTTTTCT
GCTATTGTAG TTGTAGGTGA TGAAAATGGA GTAGTTGGTC ACGGATTAGG AAAATCTAAA
GACGTTTCTG AAGCAATTGC GAAAGCAGTA GAAGATGCTA AGAAAAACTT AGTTAGAATT
CCTTTGAACG GACAATCTGT TCCTCACGAA CAAAAAGGTA AATTTGGTGG TGCGCGTGTA
TTCTTAATCC CTGCCTCTCA TGGTACAGGA GTTATTGCTG GTGGAGCTGT TCGTTCAGTT
CTTGAATCAG TAGGTATTCA CGACGTATTA TCTAAATCTC AAGGATCATC AAATCCTCAT
AACGTAGTTA AAGCAACTTT TGATGCTTTA TTACAAATGA GAAGCGCTCA TACTGTTGCA
AAACAGAGAG GAGTTTCTTT AGAAAAAGTT TTTAAAGGTT AA
 
Protein sequence
MSKYKNVELV KPSGLELKDR LVSVNRVTKV TKGGRAFGFS AIVVVGDENG VVGHGLGKSK 
DVSEAIAKAV EDAKKNLVRI PLNGQSVPHE QKGKFGGARV FLIPASHGTG VIAGGAVRSV
LESVGIHDVL SKSQGSSNPH NVVKATFDAL LQMRSAHTVA KQRGVSLEKV FKG