Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0380 |
Symbol | rpsE |
ID | 5093263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 399265 |
End bp | 399786 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644739774 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001192735 |
Protein GI | 146298144 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAT ACAAAAATGT AGAATTGGTA AAACCTAGTG GTCTTGAACT TAAAGATCGT CTAGTTAGTG TAAATCGTGT TACTAAAGTT ACAAAAGGAG GTAGAGCTTT TGGTTTTTCT GCTATTGTAG TTGTAGGTGA TGAAAATGGA GTAGTTGGTC ACGGATTAGG AAAATCTAAA GACGTTTCTG AAGCAATTGC GAAAGCAGTA GAAGATGCTA AGAAAAACTT AGTTAGAATT CCTTTGAACG GACAATCTGT TCCTCACGAA CAAAAAGGTA AATTTGGTGG TGCGCGTGTA TTCTTAATCC CTGCCTCTCA TGGTACAGGA GTTATTGCTG GTGGAGCTGT TCGTTCAGTT CTTGAATCAG TAGGTATTCA CGACGTATTA TCTAAATCTC AAGGATCATC AAATCCTCAT AACGTAGTTA AAGCAACTTT TGATGCTTTA TTACAAATGA GAAGCGCTCA TACTGTTGCA AAACAGAGAG GAGTTTCTTT AGAAAAAGTT TTTAAAGGTT AA
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Protein sequence | MSKYKNVELV KPSGLELKDR LVSVNRVTKV TKGGRAFGFS AIVVVGDENG VVGHGLGKSK DVSEAIAKAV EDAKKNLVRI PLNGQSVPHE QKGKFGGARV FLIPASHGTG VIAGGAVRSV LESVGIHDVL SKSQGSSNPH NVVKATFDAL LQMRSAHTVA KQRGVSLEKV FKG
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