| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0371 |
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| Symbol | |
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| ID | 5089572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 394413 |
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| End bp | 395405 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644739765 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001192726 |
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| Protein GI | 146298135 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.607295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAT TTAATTTTCA AAAGCCCGAT AAAGTTATCA TGATCGATTC AACCGATTTT
GAAGGTAAAT TTGAATTTAG ACCTTTAGAA CCTGGTTACG GATTGACAGT TGGTAATGCA
CTTAGAAGAG TTTTGCTTTC AGCGTTAGAA GGTTATGCAA TTACATCTGT TCGTATCGAA
GGTGTAGATC ATGAGTTTTC TACTATTTCA GGTGTTGTTG AAGATGTTAC CGAAATTATC
CTTAATCTAA AACAAGTACG TTTTAAACGT CAGATCGAAG ATATCGATAA TGAATCAGTT
ACTATTTCTG TTTCTGGTAA AGATCAATTA ACAGCAGGTG ATTTTCAAAA ATTTATCTCA
GGTTTTCAAG TTTTGAATCC AGACCTTGTT ATCTGTAATT TAGATTCTAA AATCAAATTG
AACTTCGATT TAACAATCGA AAAAGGTAGA GGATACGTTC CTGCTGAAGA GAACAAAAAA
CAGAATGCTG CAATTGGAAC GATTTTTACA GATTCTATTT TTACTCCGGT AAAAAATGTA
AAATATGCAA TCGAAAATTT CCGTGTAGAG CAAAAAACAG ATTACGAAAA ATTAGTTTTT
GAAATCAAAA CTGATGGATC TATTAATCCA AAAGATGCTC TTACTGAAGC TGCTAAAGTT
TTAATTCACC ATTTCATGTT GTTTTCTGAT GAAAGAATTA CACTTGAGGC TGACGAAATT
GCACAAACAG AATCGTATGA TGAAGAGTCA TTGCATATGA GACAATTGCT TAAAACTAAG
CTTGTTGATA TGGATTTATC TGTAAGAGCA TTAAATTGCT TGAAAGCGGC TGAAGTTGAT
ACACTTGGTG ATTTAGTATC GTTCAATAAA AATGACCTAA TGAAATTCCG TAATTTCGGT
AAAAAATCTT TAACTGAACT TGATGAACTT GTTGCAGTGA AGAATTTAAC TTTTGGAATG
GATTTAGCTA AATACAAACT AGATAAAGAA TAA
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| Protein sequence | MAIFNFQKPD KVIMIDSTDF EGKFEFRPLE PGYGLTVGNA LRRVLLSALE GYAITSVRIE
GVDHEFSTIS GVVEDVTEII LNLKQVRFKR QIEDIDNESV TISVSGKDQL TAGDFQKFIS
GFQVLNPDLV ICNLDSKIKL NFDLTIEKGR GYVPAEENKK QNAAIGTIFT DSIFTPVKNV
KYAIENFRVE QKTDYEKLVF EIKTDGSINP KDALTEAAKV LIHHFMLFSD ERITLEADEI
AQTESYDEES LHMRQLLKTK LVDMDLSVRA LNCLKAAEVD TLGDLVSFNK NDLMKFRNFG
KKSLTELDEL VAVKNLTFGM DLAKYKLDKE
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