Gene Fjoh_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0352 
Symbol 
ID5089553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp372125 
End bp373198 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content31% 
IMG OID644739746 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001192707 
Protein GI146298116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0533175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA AACTTATTGA AAACGATGAA ATATCGTTAA AAGAATTGTT ACTAAAAATT 
AGTGATTGGT ATAATTATTT GTTATCTCAA TGGAAAATAA TTGTATTAGC GGGAATTTTT
GGGGCTCTTG CAGGACTGAC CTATTCTTTC TTAAAGAAAC CTATCTATAC CGCAACATTA
TCTTTTGTTG TAGAAGATGA AAAAAGCACT GGAGGCTTAG GAGGAGCATT AGGTTTGGCT
GGTTCTTTAG GACTTGATAT TGGAGGTAAT GGAAGTAGTA TATTTTCAGG TTCAAATTTA
ACTGAACTAT TTAAGTCAAG ATCGATGGTA GAAAAAACCC TTTTGACACC TGTTCATTAT
AATAATAAGG TTATTTCGTT AGCTGAAATG TATATTCAAA TTCATAAATG GAGAGACAAA
TGGAATGATC AGCCTAAGTT TAAGAATATT AAGTTTTTAC CAAATCTTAA TCGTGATTAT
TTCACAAGAG AAAATGACAG TATCTTAGGA GTTATTTATC GTAATCTTTC TCAAAATTCA
TTATCTGTTG CACAAAAAGA TAAAAAAAAT GCAATTATTT CAATAGATGT AAGTTCTACA
AACGAATTGT TTTCATTGTA TTTTTGTGAA GCATTAGCGA AACAAGTAGG TAAGTTTTAT
GTAGAGACAA AAAGTAAAAA AGCTCGCATG AATATGGACA TTCTAGAACA TCAGGTAGAT
TCTGTCCGCT CTGAATTAAA TGGAGCAATC ACAAGTGTTG CTGTCGCTAA TGATAATACT
TTTAATTTGA ATCCAGCCCT TAATGTTCGC AGGGCACCTT CTTCGAGGAG ACAGGTAGAT
GTACAAGCAA ACACAGCCAT ATTGACAGAA TTGGTTAAAC AATCTGAATT AGCCAAAGTT
ACTTTACGTA AAGAAACTCC TTTAATCCAA GTTATTGATA GACCTATTTT GCCATTGTCA
AAAGAGTATT TTGGAAAAGC TAAAGGATTT ATCATAGGTA GTATTTTAGC ATCTTTTATT
ATAATGATTA TTTTAATAGT TAGAAGGTTG TTTAAGCAAG TATTGTTTAG TTAA
 
Protein sequence
MNDKLIENDE ISLKELLLKI SDWYNYLLSQ WKIIVLAGIF GALAGLTYSF LKKPIYTATL 
SFVVEDEKST GGLGGALGLA GSLGLDIGGN GSSIFSGSNL TELFKSRSMV EKTLLTPVHY
NNKVISLAEM YIQIHKWRDK WNDQPKFKNI KFLPNLNRDY FTRENDSILG VIYRNLSQNS
LSVAQKDKKN AIISIDVSST NELFSLYFCE ALAKQVGKFY VETKSKKARM NMDILEHQVD
SVRSELNGAI TSVAVANDNT FNLNPALNVR RAPSSRRQVD VQANTAILTE LVKQSELAKV
TLRKETPLIQ VIDRPILPLS KEYFGKAKGF IIGSILASFI IMIILIVRRL FKQVLFS