Gene Fjoh_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0333 
Symbol 
ID5089534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp354544 
End bp355092 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content29% 
IMG OID644739727 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001192688 
Protein GI146298097 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.134532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG AAAAAACGTT TATAAAAGAT TTATTAATTG TAGAACCAAC AATATTTGGA 
GATGAAAGAG GATATTTTTT TGAATCTTAC AGTAAAACTA AATTTGAAGA TCTAGATATT 
CATATTGATT TCGTTCAAGA CAATCAATCA TTCTCAAAAA GAGGAACTTT AAGAGGTTTG 
CATTATCAAA ATCCTCCGTT TGCACAAACC AAGTTAGTAC GAGTTCTAGA AGGTGAAATT 
ATTGACGTTG CTGTAGATTT AAGAAAAGAT TCAGCAACTT ATGGAAAAGT ATTTAGTGTT 
TTGTTGTCAT CTGAAAATAA AAAACAGTTA TTAGTGCCAC AAGGGTTTGC TCATGGATTT 
TCAGTTATCA GCGAGACTGC TTCGGTAATG TATAAATGTG ATCAGTTTTA TAATAAAGCT 
TCAGAAGGAG GAATTAGATT TGATGACTCA TCTTTAAATA TTGATTGGGG AATGGATTTA 
AAAGATGCAA TTGTTTCTGA AAAAGATCAA AAACTACCTT TTCTTGATAA TTGTAATAGT 
TTATTCTAA
 
Protein sequence
MKIEKTFIKD LLIVEPTIFG DERGYFFESY SKTKFEDLDI HIDFVQDNQS FSKRGTLRGL 
HYQNPPFAQT KLVRVLEGEI IDVAVDLRKD SATYGKVFSV LLSSENKKQL LVPQGFAHGF 
SVISETASVM YKCDQFYNKA SEGGIRFDDS SLNIDWGMDL KDAIVSEKDQ KLPFLDNCNS 
LF