Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0329 |
Symbol | |
ID | 5089530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 350690 |
End bp | 351625 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644739723 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001192684 |
Protein GI | 146298093 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0386838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAA GTGATAAAAT ATATATAGCA GGACATCGTG GTATGGTAGG GTCTGCTATT CTGCGCCAGT TAAAAATAAA AGGATATACA AATTTTGTTT TAAAAACTTC TTCAGAATTA GATTTGACAC AACAACAAGA TGTTGCTGAT TTCTTTCTGA AAGAAAAACC GGATTATGTT TTTTTAGCGG CTGCAAAAGT CGGTGGAATT CTTGCAAATA ATATTTATAA AGGAGATTTT ATTTATGCAA ATTTAATGAT CCAGAGTAAT GTAATTCATC ATGCCTATTT AAATAATACT AAAAAATTAA TGTTTCTAGG TTCTTCATGT ATTTATCCAA AAATGGCGCC ACAGCCATTA AAAGAAGAAT ATATGCTTAC AGGAGAGTTA GAACCAACTA ATGAACCATA TGCAATTGCT AAAATTGCTG GAATTAAAAT GTGTGATGCA TATAGAAGTC AATTTGGATG TAATTTCATT TCGGTTATGC CAACAAATTT GTATGGTCCT AATGATAATT ATGATCTAAC AAATTCGCAT GTTCTTCCAG CAATGTTGAG AAAGTTTATT ACAGCAAAAC GCAATAATGA CACTTCTGTC ACTATATGGG GTAGTGGAAG TCCTAAAAGA GAATTTTTAC ATGTAGACGA CCTTGCCGAT GCTTGTCTAT ATTTAATGGA AAATTATGAT GACCAAGGAT TAGTAAATGT AGGCGTAGGG GAAGATATTT CAATTTTAGA CTTGGCTGTT TTGATAAAAA AAATAGTTGG ATTTGAAGGA GAAATTCTAA ATGATATTTC TAAACCTGAT GGAACTCCTC GTAAATTAAT GGATGTTTCA AAATTAAGCA GCCTTGGATG GAAAGCAAAA ACAAGTTTAG AAGAAGGCAT TCAGAAAGTT TACAAAGAAA TAAAAGATTC TAATTGGGAC AAATAA
|
Protein sequence | MNKSDKIYIA GHRGMVGSAI LRQLKIKGYT NFVLKTSSEL DLTQQQDVAD FFLKEKPDYV FLAAAKVGGI LANNIYKGDF IYANLMIQSN VIHHAYLNNT KKLMFLGSSC IYPKMAPQPL KEEYMLTGEL EPTNEPYAIA KIAGIKMCDA YRSQFGCNFI SVMPTNLYGP NDNYDLTNSH VLPAMLRKFI TAKRNNDTSV TIWGSGSPKR EFLHVDDLAD ACLYLMENYD DQGLVNVGVG EDISILDLAV LIKKIVGFEG EILNDISKPD GTPRKLMDVS KLSSLGWKAK TSLEEGIQKV YKEIKDSNWD K
|
| |