Gene Fjoh_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0329 
Symbol 
ID5089530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp350690 
End bp351625 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content31% 
IMG OID644739723 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001192684 
Protein GI146298093 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0386838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA GTGATAAAAT ATATATAGCA GGACATCGTG GTATGGTAGG GTCTGCTATT 
CTGCGCCAGT TAAAAATAAA AGGATATACA AATTTTGTTT TAAAAACTTC TTCAGAATTA
GATTTGACAC AACAACAAGA TGTTGCTGAT TTCTTTCTGA AAGAAAAACC GGATTATGTT
TTTTTAGCGG CTGCAAAAGT CGGTGGAATT CTTGCAAATA ATATTTATAA AGGAGATTTT
ATTTATGCAA ATTTAATGAT CCAGAGTAAT GTAATTCATC ATGCCTATTT AAATAATACT
AAAAAATTAA TGTTTCTAGG TTCTTCATGT ATTTATCCAA AAATGGCGCC ACAGCCATTA
AAAGAAGAAT ATATGCTTAC AGGAGAGTTA GAACCAACTA ATGAACCATA TGCAATTGCT
AAAATTGCTG GAATTAAAAT GTGTGATGCA TATAGAAGTC AATTTGGATG TAATTTCATT
TCGGTTATGC CAACAAATTT GTATGGTCCT AATGATAATT ATGATCTAAC AAATTCGCAT
GTTCTTCCAG CAATGTTGAG AAAGTTTATT ACAGCAAAAC GCAATAATGA CACTTCTGTC
ACTATATGGG GTAGTGGAAG TCCTAAAAGA GAATTTTTAC ATGTAGACGA CCTTGCCGAT
GCTTGTCTAT ATTTAATGGA AAATTATGAT GACCAAGGAT TAGTAAATGT AGGCGTAGGG
GAAGATATTT CAATTTTAGA CTTGGCTGTT TTGATAAAAA AAATAGTTGG ATTTGAAGGA
GAAATTCTAA ATGATATTTC TAAACCTGAT GGAACTCCTC GTAAATTAAT GGATGTTTCA
AAATTAAGCA GCCTTGGATG GAAAGCAAAA ACAAGTTTAG AAGAAGGCAT TCAGAAAGTT
TACAAAGAAA TAAAAGATTC TAATTGGGAC AAATAA
 
Protein sequence
MNKSDKIYIA GHRGMVGSAI LRQLKIKGYT NFVLKTSSEL DLTQQQDVAD FFLKEKPDYV 
FLAAAKVGGI LANNIYKGDF IYANLMIQSN VIHHAYLNNT KKLMFLGSSC IYPKMAPQPL
KEEYMLTGEL EPTNEPYAIA KIAGIKMCDA YRSQFGCNFI SVMPTNLYGP NDNYDLTNSH
VLPAMLRKFI TAKRNNDTSV TIWGSGSPKR EFLHVDDLAD ACLYLMENYD DQGLVNVGVG
EDISILDLAV LIKKIVGFEG EILNDISKPD GTPRKLMDVS KLSSLGWKAK TSLEEGIQKV
YKEIKDSNWD K