| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0328 |
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| Symbol | |
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| ID | 5089529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 348576 |
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| End bp | 350417 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 644739722 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001192683 |
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| Protein GI | 146298092 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0440695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCTGA TTTTTTCATT TACTTTTACT TATATGCTAT TCGAAGGAAC AGCATTAGGC
TATATAATTA CTTCTCATCA GTTTGCCTTT GTTGGTGGAT TACTTTTTAT AAATATCTTT
TTCTTCTGGT TATTTAGGAC TTATTCAGGA ATTATTAGAC ATTCGTCTTA CATTGATGCC
ATTAAACTTT TGTTTTCGCA GATGTCTGTT TTGGTGTTTT TCTTATTCTT TAATTTAGTA
TTTGAATTAT ATACAGGACA CAAGGCATTT TTAAATACAG CATTATTTAT TAATCTTGTG
TTGTCATTTT GTGGCCTGTT TTTGTACAGA GTAATTGTAA AACAGACTTT TGAAATGTAT
TTCTCAGAAA AAACAAATTC AAAGCTCATA AGAACGGTAA TTTATGGAAC AGATGCTAAC
GCCATTTCTG TAGCAAATGC ACTAAAATTT GAAACTCCAT CTCGATTTAA GATTGTTGGT
TTTGTAGATA AGAATAATCA AAATGCATCT AAGCGTATGC TGGATTTACC CATTTTGATT
TTGCGTAAAA AATTGCCTGC TTTAATGCGT TCAGTTGCTG CTGAAGGGGT CATTATTGCT
GATAAAAGTT TAACAAAAGA CGAACAATTA ATTATAGTTG ATCAATGTCT TGAATTCAAT
TATAGAGTTT ATACCGTTCC TTTAATTTCA GATTGGGAAA ATCAAAAAGA AATCTCTCAA
AAAGTAAAAA ATATACAAAT TGAGGATTTA CTAGAAAGAA AACCTATTGT GTTAGATAGT
AAATCAATTT CTAAACAATT GAAGGATAAA ACAGTTCTTA TTACTGGAGC AGCTGGTTCG
ATAGGAAGTG AGATAGTTAG ACAGGTTCTT GGGTTTAATC CAAAAATAGT TATTATTTTA
GATCATGCTG AAACTCCATT ACATAATTTG TGTTTAGAAA CTCTTAGTAT GAATCCTACT
GCTAAGATTG TTGCCGTAAT TGCAGACATA AAAAGTAAAA AAGCATTAGA AAAAGTATTT
AAAAATTACA ATCCGCATGT TGTTTATCAC GCTGCGGCAT ATAAGCATGT TCCTTTGATG
GAAGAAAATC CATCACAAGC TATTTTAACT AACATACGAG GGACAAAAAA TCTAGCCGAT
TTATCTTGTA AATATCATGT CAAAAAATTT GTAATGGTAT CTACTGATAA AGCTGTAAAT
CCTAGCAATG TTATGGGAGC TAGTAAGCGT ATAGCAGAAA AGTATGTACA GTCATTATCA
TTAAAAAATC AAAAAGAAAA TATTCCAGGA GTAACTAAAT TCATTACTAC CCGCTTTGGA
AATGTGTTAG GTTCTAATGG ATCTGTTGTT CCTTTGTTTA CGAAACAAAT TGCTGAAGGA
GGTCCTGTTA CTATTACCCA CCAAGATATT ATCAGATATT TTATGACTAT TCCAGAAGCG
TGTCAATTAG TACTCGAAGC AGGGGCAATG GGTAATGGTG GAGAAATCTA TATTTTTGAT
ATGGGTAAAC CTGTAAAAAT AATAGATCTG GCAAAAAAAA TGATCAAACT TGCAGGTTTT
ATTCCGGATA AAGAGATTAA AATTAAAATA GTTGGATTAC GTCCAGGTGA AAAATTATAT
GAAGAATTAT TAAATGATAC TTCTAAAACA CTGCCAACTT ATCATAATAA AATTATGATT
GCTCAGGAAA TCCAAGATGA GTATGAAGAT TTGCATAACG ATATTGATGA ATTAATAGGT
ATTGCAGATT TTTATGAAAA TGAAGATATT GTTGCAAAAA TGAAAAAAAT TGTTCCTGAA
TTTAAAAGTA TGAACTCTGC TTTTGAAGTT TTAGATAAAT AA
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| Protein sequence | MVLIFSFTFT YMLFEGTALG YIITSHQFAF VGGLLFINIF FFWLFRTYSG IIRHSSYIDA
IKLLFSQMSV LVFFLFFNLV FELYTGHKAF LNTALFINLV LSFCGLFLYR VIVKQTFEMY
FSEKTNSKLI RTVIYGTDAN AISVANALKF ETPSRFKIVG FVDKNNQNAS KRMLDLPILI
LRKKLPALMR SVAAEGVIIA DKSLTKDEQL IIVDQCLEFN YRVYTVPLIS DWENQKEISQ
KVKNIQIEDL LERKPIVLDS KSISKQLKDK TVLITGAAGS IGSEIVRQVL GFNPKIVIIL
DHAETPLHNL CLETLSMNPT AKIVAVIADI KSKKALEKVF KNYNPHVVYH AAAYKHVPLM
EENPSQAILT NIRGTKNLAD LSCKYHVKKF VMVSTDKAVN PSNVMGASKR IAEKYVQSLS
LKNQKENIPG VTKFITTRFG NVLGSNGSVV PLFTKQIAEG GPVTITHQDI IRYFMTIPEA
CQLVLEAGAM GNGGEIYIFD MGKPVKIIDL AKKMIKLAGF IPDKEIKIKI VGLRPGEKLY
EELLNDTSKT LPTYHNKIMI AQEIQDEYED LHNDIDELIG IADFYENEDI VAKMKKIVPE
FKSMNSAFEV LDK
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