| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0290 |
|---|
| Symbol | |
|---|
| ID | 5089858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 309185 |
|---|
| End bp | 310579 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644739684 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_001192645 |
|---|
| Protein GI | 146298054 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAA AAAGTAAAAT GCATTTTGAA ATTTCAGAAC GAAAAGTTTT GCTTTTTGCA
TTTGATGCTT TATTCGTTGC TGCAATTTTG TATCTTTTAA ATTTATTTTT TGAGTTTAAT
TATTTTACAT TTGAGAGTAC TACTTTTTAT AGACCAATTA TATTTGTTGG TTATTTATTA
GTTTTCGGGA CTATTTTTGA AATGTATAAC CTTCAGGTTG CAAGTAATCA GTTTCAGATT
TTAAAAAGCG TTGTGCTTTC TGTTTCTGCA GCAGTTTTAG TTTATCTTCT TACCCCAGTT
TTATCGCCTG AGCTTCCAAA ACAACGTTTA GTAATTGTCA TCTTTTATTT TGCAGTATTA
CTTATGATGT TACTTTGGCG GTTTTTTTAC GCCATATTTC TCGCTTCACA TCGTTTTTCT
CAAAATGTAA TTTTAATTTG TGATAAAGAT CAGGTAGAAG AATTGGTTTC TGGACTTGAG
AACGTTGACC CGCATTACAG GATAATTGGT TTTGTAAATT CAGATTCAAA TTCAGATTCG
AATACTAATT TTCATTATGT AAAAGAAATC AAGAAGAATT ATTTAGAGAG ATTTGTATCG
AGATACAATG TCTCAGAAAT AGTAATTGCT TCTCAAAAGA CAGATGGAAT TACTGCTGAT
TTGTATCAGC AATTATTACA TTTATTAGAA TCGGGAAATG TTATTAGAGA ATATACTCAG
GTTTACGAGA GTAAAACACA ACGTATACCA GTACAATATA TAGAACGTGA TTTTTATCGT
TTTTTTCCTT TCAGCCGAAG CAATAACAAT AAATTGTATC TGTTTTTAAT ACGATTTTTA
GAACTGTTGT TTTCTTTTAC AGGGTTATTA GTCTGTTTTG TTTTTATTCC TTTTATTTTT
ATTGGAAATC TTTTAGCAAA TAAAGGGAGC TTGTTTTACA CGCAAGAAAG GGTTGGAAAA
AATGGTGTTG TTTTTAAGAT TTATAAATTC AGAACCATGA TTGCAGCTTC GGAAACTAAT
GGCGCTGTTT TTGCCGTTTC AAACGATAAA CGCGTAACGC CATTTGGAAA ATTCATGCGT
AAATCCAGAA TTGATGAATT ACCGCAGTTT TATAATGTTT TAAAAGGCGA TATGGCTGTA
ATTGGTCCAA GACCTGAAAG ACCTTTTTTT GTTGAAGAAA TCGCCAGAAT CATGCCTTTT
TATGAAACCC GCCACGTTAT TAAGCCGGGA CTTACAGGAT GGGCACAGGT AAATTACTCA
TACGGAGAAT CTATAGACGA AAGTTTGATC AAATTACAAT ATGATCTTTA CTACATCAAA
CATCGAAGTG TTTTTCTTGA TTTAAGTATC ACTTTTAAAA CCATTACGAC GGTTTTATTC
TATCGCGGAC AATAA
|
|---|
| Protein sequence | MRSKSKMHFE ISERKVLLFA FDALFVAAIL YLLNLFFEFN YFTFESTTFY RPIIFVGYLL
VFGTIFEMYN LQVASNQFQI LKSVVLSVSA AVLVYLLTPV LSPELPKQRL VIVIFYFAVL
LMMLLWRFFY AIFLASHRFS QNVILICDKD QVEELVSGLE NVDPHYRIIG FVNSDSNSDS
NTNFHYVKEI KKNYLERFVS RYNVSEIVIA SQKTDGITAD LYQQLLHLLE SGNVIREYTQ
VYESKTQRIP VQYIERDFYR FFPFSRSNNN KLYLFLIRFL ELLFSFTGLL VCFVFIPFIF
IGNLLANKGS LFYTQERVGK NGVVFKIYKF RTMIAASETN GAVFAVSNDK RVTPFGKFMR
KSRIDELPQF YNVLKGDMAV IGPRPERPFF VEEIARIMPF YETRHVIKPG LTGWAQVNYS
YGESIDESLI KLQYDLYYIK HRSVFLDLSI TFKTITTVLF YRGQ
|
|---|
| |