Gene Fjoh_0272 details

Gene Information

• Locus tag: Fjoh_0272
• ID: 5089840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 290445
• End bp: 290897
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644739666
• Product: alkylhydroperoxidase
• Protein accession: YP_001192627
• Protein GI: 146298036
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.300614
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACTA GACTTAATTT ATTCGAACAA GGTCAAAAAG CAGTTAGTAC ATTATTTGGA 
ATAAGCGGTT ACTTAAAAAA AGCAACAATC GAATCATCTC TTATGGAATT AATCAATTTT 
AGAATCTCTC AAATCAACAA CTGCGGTTAT TGTTTAGACA TGCATTCAAA AGAAGCTTTA 
GCCGCTGGAG AAACAACACA GCGTTTATTT GGATTAAGCG TTTGGAGAGA AGCCCCTTAT 
TACACAAAAA GAGAAAGAGT TGCTCTTGCT TTGGCAGAAG CCGTGAATGC TTGTGATGTT 
CCAGACGAAA TCTACGAAAT CGCAAAAGCT GAATTTACAG AACAAGAATT AATCGATCTT 
ACACTTGCTG TTGCTGCAAT TAATGCTTGG AATCGCCTAA ACATTACCTT TGTTAATACA 
CCAGGAACTT ACAGAGTGGG ACAATTCGGG TAA 

 

Protein sequence

METRLNLFEQ GQKAVSTLFG ISGYLKKATI ESSLMELINF RISQINNCGY CLDMHSKEAL 
AAGETTQRLF GLSVWREAPY YTKRERVALA LAEAVNACDV PDEIYEIAKA EFTEQELIDL 
TLAVAAINAW NRLNITFVNT PGTYRVGQFG