Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0258 |
Symbol | |
ID | 5091312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 278020 |
End bp | 278715 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644739650 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001192613 |
Protein GI | 146298022 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.686752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAACTGTTTT AAGCTTAAGT GCTTTATTTA TATTTACTAG TTTTTTTACA AGCTGTGATT CAGTAAAAAA TGCAAATAAC ACACAAAAAG GAGCTGGAAT TGGTGCTGTT GCCGGTGGTG TAATTGGTGC TGTTTTAGGA AATAATTTAG GGAAAGGCGG AAACGCTGCG TTAGGAGCTG CAATTGGTGC TGCTGTTGGT GGTGGAACTG GTGCTCTTAT TGGAAACAAA ATGGATAAAC AGGCTCGTGA AATCGACCAG GCTTTACCAG GTGCTTCTGT AGAAAGAGTA GGTGAAGGGA TTCATTTAAC TTTAAATGAA AATTCTGTTC GTTTTGATAC TAACAAATCA ACGTTAACTC CTACTGCAAA AGCTAACTTA GATAAATTAG TTCCTGTATT TAATGAATAT GGAGATACTG ATATTCAGAT TTTTGGTTAC ACTGATAATA CAGGAAAACC AGAGTATAAC TTAACACTTT CTGGACAAAG AGCTGCATCT GTGCAGGCTT ATTTAGTTTC AAAAGGATTA AAGTCAAGCC GTTTTAAAAC TTCAGGTTTA GGTATTGCTG ATCCTATTGC AACAAATGAT ACTCCAGAAG GAAGAGCTCA AAACCGTCGT GTTGAATTCT CAATTACAGC AAACGACAAA ATGGTTAACG ACGCAAAAGC TGAAGCTGGA AAATAA
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Protein sequence | MKKITVLSLS ALFIFTSFFT SCDSVKNANN TQKGAGIGAV AGGVIGAVLG NNLGKGGNAA LGAAIGAAVG GGTGALIGNK MDKQAREIDQ ALPGASVERV GEGIHLTLNE NSVRFDTNKS TLTPTAKANL DKLVPVFNEY GDTDIQIFGY TDNTGKPEYN LTLSGQRAAS VQAYLVSKGL KSSRFKTSGL GIADPIATND TPEGRAQNRR VEFSITANDK MVNDAKAEAG K
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