Gene Fjoh_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0228 
Symbol 
ID5091283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp239051 
End bp240049 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content35% 
IMG OID644739621 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001192584 
Protein GI146297993 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.370421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAA GAATTGCTAT TAATGGTTTT GGAAGAATTG GAAGAAATTT ATTTCGTCTT 
CTTATAAATC ATCCTGAAAT TGAAGTTGTT GCAATTAATG ATATTGCAGA TAATAAAACC
ATGTCGCATT TAATAAAATA CGACACTATT CATGGAGTTC TTCCTTTTGC TGTAAGTTTT
GACGAAGAAG GAATTATTGT CAACGAAAAA CATTATTTAT TTTTTCATGA AAAAAGTATT
TCAAATCTGG ACTGGAAAAG TCATTCGATA GATTTTGTAA TTGAATCGAC AGGGAAATAC
AAAACACATG AAGAATTAAA TGCACATATT GAAGCCGGAG CAAAAAAAGT GATACTTTCT
GCCCCATCAG AAGTTGATAC AATTAAAACA GTTGTTCTTG GTGTAAACGA AAATATATTA
GACGGAACAG AAAATATTGT TTCTAATGCA AGCTGTACTA CAAATAATGC TGCACCGATG
ATAAAAATCA TCGAAGAACT GTGCGGAATT GAGCAGGCTT ACATCACCAC AATACATTCT
TTTACGACAG ACCAAAGTCT TCACGACCAG CCGCATAAGG ATTTACGCCG TGCGAGAGGA
GCCAGTCAGT CGATTGTTCC TACAACAACA GGTGCAGCTA AGGCATTAAC GAAAATTTTT
CCTAAATTGC ACGAAAAAAT CGGGGGATGC GGTATTCGTG TACCTGTTCC CGATGGTTCA
TTGACAGACA TCACGTTCAA TGTTAAACGT GCTGTTACTA TTGAAGAAAT TAACATTGCA
TTTCAAAAAG CCTCAAAAAC AAATTTAAAA GGAATATTAG ATTACACAGA AGATCCTATC
GTTTCTGTTG ATATAATTGG CAATACACAT TCGTGCTTGT TCGACGCACA GCTTACTTCT
GTCATAGACA AAATGGTAAA AGTTGTAGGA TGGTACGATA ACGAAATTGG CTATTCATCA
CGATTAATCG ATTTGATTTT ACTGATAAGA AAAACATAA
 
Protein sequence
MKTRIAINGF GRIGRNLFRL LINHPEIEVV AINDIADNKT MSHLIKYDTI HGVLPFAVSF 
DEEGIIVNEK HYLFFHEKSI SNLDWKSHSI DFVIESTGKY KTHEELNAHI EAGAKKVILS
APSEVDTIKT VVLGVNENIL DGTENIVSNA SCTTNNAAPM IKIIEELCGI EQAYITTIHS
FTTDQSLHDQ PHKDLRRARG ASQSIVPTTT GAAKALTKIF PKLHEKIGGC GIRVPVPDGS
LTDITFNVKR AVTIEEINIA FQKASKTNLK GILDYTEDPI VSVDIIGNTH SCLFDAQLTS
VIDKMVKVVG WYDNEIGYSS RLIDLILLIR KT