Gene Fjoh_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0187 
Symbol 
ID5094515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp196482 
End bp197315 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content31% 
IMG OID644739579 
Productcupin 2 domain-containing protein 
Protein accessionYP_001192543 
Protein GI146297952 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.778643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAT TAAATCAATT CAAAACACTT ATGATTGATG AGTTTGAAGA AGAAAAATTT 
CATCTCCCGC CGCATTCTCA TACTTATTAT GAAATCATTT ATATAAAGAA AGGAAGCGGT
GTGCATCATA TCAACAACAA TCTGTTATCG TATAAAGCCG GTGATTTGTT TGTAATTTCA
CCAGATGACG AGCATTACTT TGATATTAAA AAAAGCACTC GTTTTATTTT CATCAAATTC
ACAGACAATT ATTTCAACTC AAAACAAAAC CTTACCTGCG ACGAATTTCT GGTTCATACG
CCGGAAAACT TTATGCGTGA TAAAATTCTA AAAGAAACGG TTTTAAAATT TGGCGAACCC
TGTAAAACGA TTCTTAGAAA TACGGTTGAG AACATTACAA AATATGACCA ATATATTGAT
GTAACGAATT CGCCAATTGT TTTTTATCAG ATTCTTTCGA TTTTTGGTTT AATAAAAGAA
ACTATTCGAT GCATGAATCT GCAGATGACT TCGACTCATA TCGATAATGA ACAAATTGCA
AATTACATTC ACCAGAATAT TTATCAGCCA AAACTGGTAC AAATAAAAGT AATTGCTGAA
CATTTTAATA TTGCCCAGAC GTATTTCAGT GCTTATTTTA AAAGAACTTT TTCAATAAGT
TATCGCGATT ATATCCATAA TTTGAGGACA ACATTAATAG AGAAAAGATT TCAAAATAAT
CAATTGCCTA TTAAGCAGAT TGCTTATGAA TTTGGTTTTA CAGACGAGAG CCATTTGACT
AATTATTTTA AAAAGAAAAG AAACATGAAG CCTACTGATT TTAAAAGGCT TTAG
 
Protein sequence
MPKLNQFKTL MIDEFEEEKF HLPPHSHTYY EIIYIKKGSG VHHINNNLLS YKAGDLFVIS 
PDDEHYFDIK KSTRFIFIKF TDNYFNSKQN LTCDEFLVHT PENFMRDKIL KETVLKFGEP
CKTILRNTVE NITKYDQYID VTNSPIVFYQ ILSIFGLIKE TIRCMNLQMT STHIDNEQIA
NYIHQNIYQP KLVQIKVIAE HFNIAQTYFS AYFKRTFSIS YRDYIHNLRT TLIEKRFQNN
QLPIKQIAYE FGFTDESHLT NYFKKKRNMK PTDFKRL