Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0187 |
Symbol | |
ID | 5094515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 196482 |
End bp | 197315 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644739579 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001192543 |
Protein GI | 146297952 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.778643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAT TAAATCAATT CAAAACACTT ATGATTGATG AGTTTGAAGA AGAAAAATTT CATCTCCCGC CGCATTCTCA TACTTATTAT GAAATCATTT ATATAAAGAA AGGAAGCGGT GTGCATCATA TCAACAACAA TCTGTTATCG TATAAAGCCG GTGATTTGTT TGTAATTTCA CCAGATGACG AGCATTACTT TGATATTAAA AAAAGCACTC GTTTTATTTT CATCAAATTC ACAGACAATT ATTTCAACTC AAAACAAAAC CTTACCTGCG ACGAATTTCT GGTTCATACG CCGGAAAACT TTATGCGTGA TAAAATTCTA AAAGAAACGG TTTTAAAATT TGGCGAACCC TGTAAAACGA TTCTTAGAAA TACGGTTGAG AACATTACAA AATATGACCA ATATATTGAT GTAACGAATT CGCCAATTGT TTTTTATCAG ATTCTTTCGA TTTTTGGTTT AATAAAAGAA ACTATTCGAT GCATGAATCT GCAGATGACT TCGACTCATA TCGATAATGA ACAAATTGCA AATTACATTC ACCAGAATAT TTATCAGCCA AAACTGGTAC AAATAAAAGT AATTGCTGAA CATTTTAATA TTGCCCAGAC GTATTTCAGT GCTTATTTTA AAAGAACTTT TTCAATAAGT TATCGCGATT ATATCCATAA TTTGAGGACA ACATTAATAG AGAAAAGATT TCAAAATAAT CAATTGCCTA TTAAGCAGAT TGCTTATGAA TTTGGTTTTA CAGACGAGAG CCATTTGACT AATTATTTTA AAAAGAAAAG AAACATGAAG CCTACTGATT TTAAAAGGCT TTAG
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Protein sequence | MPKLNQFKTL MIDEFEEEKF HLPPHSHTYY EIIYIKKGSG VHHINNNLLS YKAGDLFVIS PDDEHYFDIK KSTRFIFIKF TDNYFNSKQN LTCDEFLVHT PENFMRDKIL KETVLKFGEP CKTILRNTVE NITKYDQYID VTNSPIVFYQ ILSIFGLIKE TIRCMNLQMT STHIDNEQIA NYIHQNIYQP KLVQIKVIAE HFNIAQTYFS AYFKRTFSIS YRDYIHNLRT TLIEKRFQNN QLPIKQIAYE FGFTDESHLT NYFKKKRNMK PTDFKRL
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