Gene Fjoh_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0161 
Symbol 
ID5094490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp166537 
End bp167436 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content34% 
IMG OID644739554 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001192518 
Protein GI146297927 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.554494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATCGCTTATT GGCAAAATGG CTCAACGATG ATTTATCTCC GGATGAATTG 
GCAGCATTTG AGGCAAGTCC GGATTTTGAA AAATATCAAA AAATCAAGAA TTATACAGCT
CATTTAGAGG TTGGAGATCT TGATGAAAAC GCTATGCTGT CGAATATTTT GAGTCAGAAA
AAAACAGCTC CAAAAGTTGT ACCGCTATAC AAAAAATGGG CTTTTAGAGC CGCTGCAATA
TTTGTTCTCG CATTGGCAGT AACTTTTGTA ATGCAGTTTT TTGTGCCTGA GACTGAAACA
GCCGATTTTG GAAAAAGAAC CACTTTTTCA TTACCGGATA ATTCAGAAGT AGTATTGAAT
TCAGGTTCTG AAATACAGTA TAAAAAATGG AACTGGGACA ACAGCAGGCA TTTAGAATTA
AAAGGCGAAG CTTATTTTAG AGTAGCCAAA GGCCGAAAAT TTGAAGTAGA AACCCGTCTT
GGAAAAGTAA CGGTTTTAGG AACCCAGTTT AATGTAAAAA CCAGAAAAAA CAGGTTTGAT
GTAGTGTGTT ATGAAGGACG TGTAAAAGTA AATTATAACA ATACCCAAAT TTTATTAACC
CACGGGCAAA GCGTAAGTTT TGAAAACGGA AAACAGGTTA ACCTGACTGT AAATACATCA
AAACCGGAAT GGATTGACAA TCAAATAGGG TTTTATAAAG AAAATATCAG AAGTCTTCTG
GATGAAGTTG AAAGACAATA TAACATTAAG ATCGAATTAA ATACAAAAGA TACAACATCA
TTATTTACAG GGAAATTACC CGCTAAAGAT TTAAATACAG CTTTGCAGAT TATTAGTACA
ACATATCATT TAGAGGCTAA ACAAGTCTCG AAAAATAAAA TAATATTTGA CGAAAAATAA
 
Protein sequence
MKKNRLLAKW LNDDLSPDEL AAFEASPDFE KYQKIKNYTA HLEVGDLDEN AMLSNILSQK 
KTAPKVVPLY KKWAFRAAAI FVLALAVTFV MQFFVPETET ADFGKRTTFS LPDNSEVVLN
SGSEIQYKKW NWDNSRHLEL KGEAYFRVAK GRKFEVETRL GKVTVLGTQF NVKTRKNRFD
VVCYEGRVKV NYNNTQILLT HGQSVSFENG KQVNLTVNTS KPEWIDNQIG FYKENIRSLL
DEVERQYNIK IELNTKDTTS LFTGKLPAKD LNTALQIIST TYHLEAKQVS KNKIIFDEK