Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0161 |
Symbol | |
ID | 5094490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 166537 |
End bp | 167436 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739554 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001192518 |
Protein GI | 146297927 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.554494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA ATCGCTTATT GGCAAAATGG CTCAACGATG ATTTATCTCC GGATGAATTG GCAGCATTTG AGGCAAGTCC GGATTTTGAA AAATATCAAA AAATCAAGAA TTATACAGCT CATTTAGAGG TTGGAGATCT TGATGAAAAC GCTATGCTGT CGAATATTTT GAGTCAGAAA AAAACAGCTC CAAAAGTTGT ACCGCTATAC AAAAAATGGG CTTTTAGAGC CGCTGCAATA TTTGTTCTCG CATTGGCAGT AACTTTTGTA ATGCAGTTTT TTGTGCCTGA GACTGAAACA GCCGATTTTG GAAAAAGAAC CACTTTTTCA TTACCGGATA ATTCAGAAGT AGTATTGAAT TCAGGTTCTG AAATACAGTA TAAAAAATGG AACTGGGACA ACAGCAGGCA TTTAGAATTA AAAGGCGAAG CTTATTTTAG AGTAGCCAAA GGCCGAAAAT TTGAAGTAGA AACCCGTCTT GGAAAAGTAA CGGTTTTAGG AACCCAGTTT AATGTAAAAA CCAGAAAAAA CAGGTTTGAT GTAGTGTGTT ATGAAGGACG TGTAAAAGTA AATTATAACA ATACCCAAAT TTTATTAACC CACGGGCAAA GCGTAAGTTT TGAAAACGGA AAACAGGTTA ACCTGACTGT AAATACATCA AAACCGGAAT GGATTGACAA TCAAATAGGG TTTTATAAAG AAAATATCAG AAGTCTTCTG GATGAAGTTG AAAGACAATA TAACATTAAG ATCGAATTAA ATACAAAAGA TACAACATCA TTATTTACAG GGAAATTACC CGCTAAAGAT TTAAATACAG CTTTGCAGAT TATTAGTACA ACATATCATT TAGAGGCTAA ACAAGTCTCG AAAAATAAAA TAATATTTGA CGAAAAATAA
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Protein sequence | MKKNRLLAKW LNDDLSPDEL AAFEASPDFE KYQKIKNYTA HLEVGDLDEN AMLSNILSQK KTAPKVVPLY KKWAFRAAAI FVLALAVTFV MQFFVPETET ADFGKRTTFS LPDNSEVVLN SGSEIQYKKW NWDNSRHLEL KGEAYFRVAK GRKFEVETRL GKVTVLGTQF NVKTRKNRFD VVCYEGRVKV NYNNTQILLT HGQSVSFENG KQVNLTVNTS KPEWIDNQIG FYKENIRSLL DEVERQYNIK IELNTKDTTS LFTGKLPAKD LNTALQIIST TYHLEAKQVS KNKIIFDEK
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