Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0155 |
Symbol | |
ID | 5094484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 161333 |
End bp | 162475 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644739548 |
Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
Protein accession | YP_001192512 |
Protein GI | 146297921 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00273299 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACA GAATTTTTAA AATCCTAAAA CGAATGTTTA TAGTTATTGC CGTCCTTTTG CTTATTCTCG CTTTCAGTAC TTGGCTCTAT ATGCAAAAAG CAGTTTTTGG AAGTTTACCT TCTCAAGAAA GCATGGTCAG AATTCAAAAA TCAGTTCATT ATAAAAATGG TGAATTTCAA AATAATACTT ACACGCCTAC ATTTGCTCCC GGTTACACTT TTTGGGGCGT AATAAGAAGT CAGCTTTTTG ATAAAACAGT TCCAACCGAA CCTTCTGGTA AAATTCCGTC TGTAAAAAGA GATTTAAAAC ACCTGCCTGC CAATCAAAAT CTTTTAGTTT GGTTTGGGCA TTCTTCTTCC TTTTTGCAGG TTGACGGAAA GAAAATTTTA ATCGATCCGG TTTTTAGCAG CAATGCATCG CCGCTGCCAA ACAGCGTAAA AGTTTTTGCA GGAACAAATT CGTATCAGGT ACAGGATTTA CCAGACATTG ATTATCTGCT GATTTCTCAC GATCATTACG ATCATCTGGA TTACCCAACC ATTTTAGCAT TAAAAGAAAA AGTAAAAACC GTAATCTGCG GTCTGGGCGT TGGCGCACAT TTTGAACGCT GGGGATATCC TAAAAATAAA ATCATCGAAA AAGACTGGAA CGATTCTGTT ACCGTTGGGC AGTATTACAC CATTCATACG CTTCCGGCAA GACATAAATC AGGACGCGGT TTAAAACAGA ACCAATCTTT ATGGGTTTCT TTTTTAATTC ATTCGCCTAA AACAAAAATA TTCTACAGCG GCGACGGCGG TTACGACACA CACTTTGCCG AAATTGGAAA AAAGTTTGGT CCAATTGATA TTGCGATTAT GGAAAACGGA CAATACAACA AAGCCTGGCA TTATATCCAC ATGCTTCCTG AAGAAACTTT ACAAGCTGCA AAAGATCTCA ACGCCAAAAG CATGATTCCA GTTCATAATT CAAAATTTGC ACTTGCCAAA CATACCTGGA ACGAACCGCT TAATGAAATC AGCCGTTTAA ATAAAAAATA TCAAATTCCG TTAATTACGC CCGTTATTGG AGAAATCGTT ATTTTTGAGA ATCATAAAGT TTTTCCTGAA TGGTGGAAAA ATAATACTGA CAAACCAATT TAA
|
Protein sequence | MKNRIFKILK RMFIVIAVLL LILAFSTWLY MQKAVFGSLP SQESMVRIQK SVHYKNGEFQ NNTYTPTFAP GYTFWGVIRS QLFDKTVPTE PSGKIPSVKR DLKHLPANQN LLVWFGHSSS FLQVDGKKIL IDPVFSSNAS PLPNSVKVFA GTNSYQVQDL PDIDYLLISH DHYDHLDYPT ILALKEKVKT VICGLGVGAH FERWGYPKNK IIEKDWNDSV TVGQYYTIHT LPARHKSGRG LKQNQSLWVS FLIHSPKTKI FYSGDGGYDT HFAEIGKKFG PIDIAIMENG QYNKAWHYIH MLPEETLQAA KDLNAKSMIP VHNSKFALAK HTWNEPLNEI SRLNKKYQIP LITPVIGEIV IFENHKVFPE WWKNNTDKPI
|
| |