Gene Fjoh_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0149 
Symbol 
ID5094478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp153546 
End bp154388 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content32% 
IMG OID644739542 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001192506 
Protein GI146297915 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.528314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAG AAAAATTAGA CGAAGAGTTT GAAAAGTTAT GGAATGAAAC ACCAGCTTCG 
CATTCAGATA AAATAAAAGA AGCTTCGTGG GGAAAATTCC ATTCAAAAAC TTTTACTCCA
AAGAAAAAGA AATTTAAACC TTGGCGCTAT TATGCTGCCG CGGCGGTTTT ACTTTTTGTT
CTTGTAGGAA CAGGAATTTA TTTTACCAAT GATTCAGCAG CAGGAGCAAT TGTACTTCCT
GAAAATGTGA TTGAAAATAC TACTTTAAAA ATAAAACATG TTGTGCTGCC AGACAGCTCA
AAAGTAGAAC TAAGTCCAAA TTCTAAAATT TCATACGGAA ACAACTTTGC ATTAAACAGA
AAAATTGAAA TTGTGGGTGA AGCTTATTTT CAGGTAAAAA AAGACAAACA GCATCCGTTT
CAGGTTTTTT GCAACGAAAC AACCACAACC GTTTTAGGAA CTTGTTTTAC TGTAAAAGGA
TTTCAAAAAA AGGAAGTAAC TGTTGAATTG TTTGAAGGAA GTGTGCAGAT GAATGTAAAA
GGCCAGGATC AGAATTGGGT TTTAAAACCG GGACAGAAAT TTACTTACGG AAATCAAACC
GCATCAGTAG CAGAATTCAG CCGATTTATA GATTTTGATA ATGAAAAGCT AACTGTTGTA
AGTACTTACA TCGAAGAAAA TTACGGATAT AAAGTGACAC TGCCTAAAGA ATATAAAGAC
CAGAAAATCA CGATTAGAAT AAACAGAAAA GAAGATTTAA AAATAATTGT ACAATTAATA
TCAGAAATGT ATAACCTAAA CTTTGAAATA AATGAAGATC TAAAACAGAT TACTTTTCAA
TAA
 
Protein sequence
MDKEKLDEEF EKLWNETPAS HSDKIKEASW GKFHSKTFTP KKKKFKPWRY YAAAAVLLFV 
LVGTGIYFTN DSAAGAIVLP ENVIENTTLK IKHVVLPDSS KVELSPNSKI SYGNNFALNR
KIEIVGEAYF QVKKDKQHPF QVFCNETTTT VLGTCFTVKG FQKKEVTVEL FEGSVQMNVK
GQDQNWVLKP GQKFTYGNQT ASVAEFSRFI DFDNEKLTVV STYIEENYGY KVTLPKEYKD
QKITIRINRK EDLKIIVQLI SEMYNLNFEI NEDLKQITFQ