Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0149 |
Symbol | |
ID | 5094478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 153546 |
End bp | 154388 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739542 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001192506 |
Protein GI | 146297915 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.528314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAG AAAAATTAGA CGAAGAGTTT GAAAAGTTAT GGAATGAAAC ACCAGCTTCG CATTCAGATA AAATAAAAGA AGCTTCGTGG GGAAAATTCC ATTCAAAAAC TTTTACTCCA AAGAAAAAGA AATTTAAACC TTGGCGCTAT TATGCTGCCG CGGCGGTTTT ACTTTTTGTT CTTGTAGGAA CAGGAATTTA TTTTACCAAT GATTCAGCAG CAGGAGCAAT TGTACTTCCT GAAAATGTGA TTGAAAATAC TACTTTAAAA ATAAAACATG TTGTGCTGCC AGACAGCTCA AAAGTAGAAC TAAGTCCAAA TTCTAAAATT TCATACGGAA ACAACTTTGC ATTAAACAGA AAAATTGAAA TTGTGGGTGA AGCTTATTTT CAGGTAAAAA AAGACAAACA GCATCCGTTT CAGGTTTTTT GCAACGAAAC AACCACAACC GTTTTAGGAA CTTGTTTTAC TGTAAAAGGA TTTCAAAAAA AGGAAGTAAC TGTTGAATTG TTTGAAGGAA GTGTGCAGAT GAATGTAAAA GGCCAGGATC AGAATTGGGT TTTAAAACCG GGACAGAAAT TTACTTACGG AAATCAAACC GCATCAGTAG CAGAATTCAG CCGATTTATA GATTTTGATA ATGAAAAGCT AACTGTTGTA AGTACTTACA TCGAAGAAAA TTACGGATAT AAAGTGACAC TGCCTAAAGA ATATAAAGAC CAGAAAATCA CGATTAGAAT AAACAGAAAA GAAGATTTAA AAATAATTGT ACAATTAATA TCAGAAATGT ATAACCTAAA CTTTGAAATA AATGAAGATC TAAAACAGAT TACTTTTCAA TAA
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Protein sequence | MDKEKLDEEF EKLWNETPAS HSDKIKEASW GKFHSKTFTP KKKKFKPWRY YAAAAVLLFV LVGTGIYFTN DSAAGAIVLP ENVIENTTLK IKHVVLPDSS KVELSPNSKI SYGNNFALNR KIEIVGEAYF QVKKDKQHPF QVFCNETTTT VLGTCFTVKG FQKKEVTVEL FEGSVQMNVK GQDQNWVLKP GQKFTYGNQT ASVAEFSRFI DFDNEKLTVV STYIEENYGY KVTLPKEYKD QKITIRINRK EDLKIIVQLI SEMYNLNFEI NEDLKQITFQ
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