Gene Fjoh_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0147 
Symbol 
ID5094476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp152756 
End bp153277 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content32% 
IMG OID644739540 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001192504 
Protein GI146297913 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.39503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA AAAAATTAAT ACTAAGTTTA AAAAAAGGTA ATGAAGCAGC TTTTAAAGAG 
GTGTATTTCA ATTACTACGA TAAACTGGTA AATATTGCCA AACGATTTAA TCTCACGGTT
CTTACTCCTG AAGACTTTGT TCAGGAAAGT CTTTTAAGAC TTTATAACAA AAGAGAACTT
CTTAACGAAG ATGTTTTACT TGACAAGCAG TTATTTACTA TTTGCAAAAA CATCATCATT
AATCATGTTA ACAGAGAAAG CAAAATAATT CAGCTTGACC CGCATAAAGC TGATATTGCC
GAAGAAGAAA CTGACTTGGG AGTTTTTGAG GATAGAAAAG AAAAATTATA CAATTTCATC
AATCAGCTTC CTGAGCAGCA GCAAAAAATA TTTACTTTAC ACAAACTGGA AAACCTTAGC
TATAAGGAGA TTGCAGAGCT CACAGACCTT TCTGAGAAGA CTATTGCCAA TCATATTTAT
CTCGCCAGTA AATTTATTCG AAAAAAAATC GAAAACCATT AG
 
Protein sequence
MDNKKLILSL KKGNEAAFKE VYFNYYDKLV NIAKRFNLTV LTPEDFVQES LLRLYNKREL 
LNEDVLLDKQ LFTICKNIII NHVNRESKII QLDPHKADIA EEETDLGVFE DRKEKLYNFI
NQLPEQQQKI FTLHKLENLS YKEIAELTDL SEKTIANHIY LASKFIRKKI ENH