Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0147 |
Symbol | |
ID | 5094476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 152756 |
End bp | 153277 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739540 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001192504 |
Protein GI | 146297913 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.39503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAATA AAAAATTAAT ACTAAGTTTA AAAAAAGGTA ATGAAGCAGC TTTTAAAGAG GTGTATTTCA ATTACTACGA TAAACTGGTA AATATTGCCA AACGATTTAA TCTCACGGTT CTTACTCCTG AAGACTTTGT TCAGGAAAGT CTTTTAAGAC TTTATAACAA AAGAGAACTT CTTAACGAAG ATGTTTTACT TGACAAGCAG TTATTTACTA TTTGCAAAAA CATCATCATT AATCATGTTA ACAGAGAAAG CAAAATAATT CAGCTTGACC CGCATAAAGC TGATATTGCC GAAGAAGAAA CTGACTTGGG AGTTTTTGAG GATAGAAAAG AAAAATTATA CAATTTCATC AATCAGCTTC CTGAGCAGCA GCAAAAAATA TTTACTTTAC ACAAACTGGA AAACCTTAGC TATAAGGAGA TTGCAGAGCT CACAGACCTT TCTGAGAAGA CTATTGCCAA TCATATTTAT CTCGCCAGTA AATTTATTCG AAAAAAAATC GAAAACCATT AG
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Protein sequence | MDNKKLILSL KKGNEAAFKE VYFNYYDKLV NIAKRFNLTV LTPEDFVQES LLRLYNKREL LNEDVLLDKQ LFTICKNIII NHVNRESKII QLDPHKADIA EEETDLGVFE DRKEKLYNFI NQLPEQQQKI FTLHKLENLS YKEIAELTDL SEKTIANHIY LASKFIRKKI ENH
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