Gene Fjoh_0137 details

Gene Information

• Locus tag: Fjoh_0137
• ID: 5094466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 144138
• End bp: 146033
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644739529
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001192494
• Protein GI: 146297903
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.837204
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGACG CGCAGGAAAT TCTTTTAAAA TACTGGAAAC ACTCCAGTTT TAGACCGTTA 
CAAAAAGAAA TTATCGATTC GGTTTTAGAA GGTCAGGACA CTTTTGCACT GCTGCCAACC 
GGAGGCGGAA AATCAATTTG TTTTCAGGTT CCGGCTATGA TGCGTGAAGG AATCTGTCTG 
GTAATTTCAC CTTTGATCGC TTTAATGAAA GATCAGGTGG CGAATCTGCA AAAAAGAGAT 
ATTAAAGCGA TTGCACTTAC AGGCGGCATT CATACAGAAG AAATTATTGA TCTGCTGGAT 
AACTGCCAAT TCGGAAATTA TAAATTCCTT TATCTTTCTC CGGAACGTTT ACAATCGGAC 
TGGATTTTAG AAAGAATCAA AAATCTTCCT ATAAATTTAA TTGCCATTGA TGAAGCACAT 
TGTGTTTCGC AATGGGGGCA TGATTTTAGA CCTGCTTATT TAAAAATTTC TGAACTTAAA 
AAATACTTCC CTAAAATTCC GTTTTTAGCT TTGACCGCAA CAGCGACTCC TAGAGTTGTT 
GAAGACATCA AAACCGAACT CGGATTAAAA GACACCAAAC TTTTTCAACA GTCTTTTGAA 
AGAAAGAATA TTGCATACAT GGTTTTTGAA GTTGAAGACA AATTATATCG TGTCGAGCAG 
ATTTTAAAGA AAAATCCACA GCCGTCTATT ATATATGTAC GAAACAGAAA ATCATGCCTT 
AATATGTCAA CTCAATTACA ATCGTTAGGA TTTAGAGCAA CGTATTATCA CGGCGGACTT 
TCGGCTCAGG AAAAAGATAA AAACATGCAG TTGTGGATGT CGGAGCAGGC ACAAGTTATT 
GTAGCCACCA ATGCGTTTGG AATGGGAATC GACAAAGACA ATGTAAAAAC GGTTATTCAT 
ACTCAATTAC CTGAAAATTT AGAAAACTAC TATCAGGAAT CTGGACGAGC GGGACGAAAT 
GGAGAAAAGG CTTTCTCGGT TTTATTATTC AATAATTCTG ATGCAACTCA AACAGAACAA 
CAGTTTATAA ATGTTTTGCC AGACAAGAAG TTCTTAAAAA CCATATTTAT TAAACTTTGT 
AATTATTTTC AAATCGCTTA TGGTGAAGGT TTAGATGATT CGTATTCGTT TAAAATGAAT 
CATTTTTGCA ATAAATATGA CTTCCCTACT TTAAAAACTT ATAATGCACT GCAGTTTTTA 
AATCAGCAAG GCATTATTAC CATGTCTCAG GAATTTTCAG AAAAGGTTAC AATGCAGTTT 
TTAATAGAAT CCAAGGAAGT GATTCGATAC ATGAGCCTGA ACCCGAATGA CGAAGAAATT 
ATTCTGGCAA TTTTAAGAAC TTACCCAGGG ATTCATGAAA TGAAAACACC GCTTAATCTC 
TCACTTATTG CCAAAAAATC AAATCATTCT GAAGAACAAG TTACAGCACT TTTAGAAAAA 
TTAAAAGAGA AAGAGATCAT TGAGTATAAA TCTAAAAATA ACGACGCGAC TATTTTATTT 
AATGAAGTCC GCGAAGATGA TTTGACGATA AACAGGGTTT CTAAATATCT GGAAAAACAA 
AATAAACTGA AACGCGACCA GCTTTCGTCT GTACTATATT ATATAAAAGA AGACAAAACT 
TGTAAAAACC GACTGGTTTT GGATTATTTT GGAGAAGAAA CCAAAGTCAA TTGCGGTGTT 
TGTTCTTACT GCATTACTCA AAAAGGAAAA ATCACAGAAG CTGATTCTAT TGCCGATAAA 
ATTCTTCACT TATTAAAAGC AACTGCCTTA ACTTCGCGCG AAATTCAAAA TCAAATTAAA 
TTAGACGCAA AAGATGTTCT TTTGGTATTG CAGGAATTAT TAGAAAACAA TCATATCGTA 
ATATTAGCGA ACAATAAATA CACTTTAAAA TCATAA 

 

Protein sequence

MLDAQEILLK YWKHSSFRPL QKEIIDSVLE GQDTFALLPT GGGKSICFQV PAMMREGICL 
VISPLIALMK DQVANLQKRD IKAIALTGGI HTEEIIDLLD NCQFGNYKFL YLSPERLQSD 
WILERIKNLP INLIAIDEAH CVSQWGHDFR PAYLKISELK KYFPKIPFLA LTATATPRVV 
EDIKTELGLK DTKLFQQSFE RKNIAYMVFE VEDKLYRVEQ ILKKNPQPSI IYVRNRKSCL 
NMSTQLQSLG FRATYYHGGL SAQEKDKNMQ LWMSEQAQVI VATNAFGMGI DKDNVKTVIH 
TQLPENLENY YQESGRAGRN GEKAFSVLLF NNSDATQTEQ QFINVLPDKK FLKTIFIKLC 
NYFQIAYGEG LDDSYSFKMN HFCNKYDFPT LKTYNALQFL NQQGIITMSQ EFSEKVTMQF 
LIESKEVIRY MSLNPNDEEI ILAILRTYPG IHEMKTPLNL SLIAKKSNHS EEQVTALLEK 
LKEKEIIEYK SKNNDATILF NEVREDDLTI NRVSKYLEKQ NKLKRDQLSS VLYYIKEDKT 
CKNRLVLDYF GEETKVNCGV CSYCITQKGK ITEADSIADK ILHLLKATAL TSREIQNQIK 
LDAKDVLLVL QELLENNHIV ILANNKYTLK S