Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0115 |
Symbol | |
ID | 5090882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 119723 |
End bp | 121552 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644739507 |
Product | ABC transporter related |
Protein accession | YP_001192472 |
Protein GI | 146297881 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATT TCAAAAAAAT AGTTCCTTTT ATATATCCGT ATAAAAAATA CGCATTCTTA AATATCTTTT TTAATGTTTT GTATGCTCTT TTCAGCACAC TTTCGTTTGT TGCTTTAATA CCAATGCTTC AGGTTTTATT TGACCAGACA AAAGAAAGAA AAGTTAAACC TGTATACGAA GGCATTTTAA AACTTCAGCA GTACGGAGAA GACTATTTGA GTTATTATAT AACAACAACA AAAGGCACTC ACGATCCTGG ATACATTTTA TCTATAATGG TCGCGATTAT AATTTCGATC TTTTTATTAA AAAACCTAGC CGATTATTTA GCCATGTTTT TTATCACTTT TTTACGAAAT GGTGTTTTAA AAGATATGAG AAATGCTTTG TATAAAAGAA CATTAGAACT TCCGCTGGCT TTTTATTCTG AAAAAAGAAA AGGAGATGTT ATTTCTAGAA TTTCTGCAGA CGTAAATGAG GTTCAGAATT CCTTTTTAGC AATTTTGGAG CTTATTGTTA AAGAACCGCT GACCATTATT TTCACCATAA CAACAATGCT TATTATCAGC ACGAAGCTGA CAATATTTGT ATTTATTTTT ATTCCAATTT CCGGCTATAT TATTTCATTA ATTGGAAAAC AATTAAAAAA ACAATCTACA AAAGCACAAG AAGAACAAGG TACTTTTTTA TCTACTATCG AAGAAACCGT TGGAGGATTA AAAGTGGTAA AAGGCTACAA TGCTGAAGGC TATTTTAATA CTGTATTTCA AAATTCTACT GAACGTTTTT TTAGCTTATC AAACAAAATA GGAAACCGTC AAAACTTAGC TTCTCCAGCA AGTGAGTTTA TGGGAATCAC CGTAATTGCT ATTCTATTAT GGTATGGAGG ACAAATGGTT TTGATTGACA AAACACTAAG CGGTCCTTCG TTTATTGCTT ACATGGGATT AGCTTATAAT ATTTTAACTC CTGCAAAAGC CATTTCTAAA GCTTCATACG GAGTAAAAAG AGGAAATGCT GCTGCCGAAC GTGTTCTTGA AATATTAGAA CAGGAAAACA CAATTACATC AAAAGAAAAT GCAATCGAAA AAACATCTTT TGATTCTATT ATAGATGTGC AGCATGTTAA TTTTAAATAC GAAGAAGAAA CTGTTTTAAA AGATTTTTCT CTTCAAATTA AAAAAGGACA GACTGTTGCA CTTGTGGGGC AGTCTGGAAG CGGAAAAAGT ACAATTGCCA ATTTGCTGAC TCGTTTTTAT GATGTAAACG AAGGTTCAAT TTCTATTGAC GGAATCAATA TTAAAGACAT GAATCTGCAA TCGCTTCGCA GCTTAATGGG ATTGGTAACA CAAGACAGTA TTTTATTTAA TGACACCATT AAAGCAAATA TTTCTTTAGG AAAATTAGAT GCAACTGATG ATGAAATTAT CGAAGCTTTA AAAATTGCTA ACGCATATGA GTTTGTAAAA GAACTGCCGC TGGGAATCTA CACTAACATT GGAGACAGCG GAAACAAACT TTCGGGCGGA CAAAAACAAC GTTTATCTAT TGCCCGTGCC GTATTGAAAA ATCCGCCGAT AATGATTCTG GACGAAGCAA CATCAGCATT AGATACAGAA AGTGAAAAAT TTGTTCAGGT TGCGCTCGAA AACATGATGC AGAACAGAAC ATCGATCGTA ATTGCCCACC GACTTTCAAC GATTCAAAAG GCAGACGTTA TTGTTGTAAT GCAAAAAGGA AAAATTGTAG AACAGGGAAC TCACGAAGAA CTGATTGCAC ACAACGGAAC TTACAACAAA TTAGTAACGA TGCAGTCTCT AGAGTCATAA
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Protein sequence | MSNFKKIVPF IYPYKKYAFL NIFFNVLYAL FSTLSFVALI PMLQVLFDQT KERKVKPVYE GILKLQQYGE DYLSYYITTT KGTHDPGYIL SIMVAIIISI FLLKNLADYL AMFFITFLRN GVLKDMRNAL YKRTLELPLA FYSEKRKGDV ISRISADVNE VQNSFLAILE LIVKEPLTII FTITTMLIIS TKLTIFVFIF IPISGYIISL IGKQLKKQST KAQEEQGTFL STIEETVGGL KVVKGYNAEG YFNTVFQNST ERFFSLSNKI GNRQNLASPA SEFMGITVIA ILLWYGGQMV LIDKTLSGPS FIAYMGLAYN ILTPAKAISK ASYGVKRGNA AAERVLEILE QENTITSKEN AIEKTSFDSI IDVQHVNFKY EEETVLKDFS LQIKKGQTVA LVGQSGSGKS TIANLLTRFY DVNEGSISID GINIKDMNLQ SLRSLMGLVT QDSILFNDTI KANISLGKLD ATDDEIIEAL KIANAYEFVK ELPLGIYTNI GDSGNKLSGG QKQRLSIARA VLKNPPIMIL DEATSALDTE SEKFVQVALE NMMQNRTSIV IAHRLSTIQK ADVIVVMQKG KIVEQGTHEE LIAHNGTYNK LVTMQSLES
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