Gene Fjoh_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0115 
Symbol 
ID5090882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp119723 
End bp121552 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content33% 
IMG OID644739507 
ProductABC transporter related 
Protein accessionYP_001192472 
Protein GI146297881 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT TCAAAAAAAT AGTTCCTTTT ATATATCCGT ATAAAAAATA CGCATTCTTA 
AATATCTTTT TTAATGTTTT GTATGCTCTT TTCAGCACAC TTTCGTTTGT TGCTTTAATA
CCAATGCTTC AGGTTTTATT TGACCAGACA AAAGAAAGAA AAGTTAAACC TGTATACGAA
GGCATTTTAA AACTTCAGCA GTACGGAGAA GACTATTTGA GTTATTATAT AACAACAACA
AAAGGCACTC ACGATCCTGG ATACATTTTA TCTATAATGG TCGCGATTAT AATTTCGATC
TTTTTATTAA AAAACCTAGC CGATTATTTA GCCATGTTTT TTATCACTTT TTTACGAAAT
GGTGTTTTAA AAGATATGAG AAATGCTTTG TATAAAAGAA CATTAGAACT TCCGCTGGCT
TTTTATTCTG AAAAAAGAAA AGGAGATGTT ATTTCTAGAA TTTCTGCAGA CGTAAATGAG
GTTCAGAATT CCTTTTTAGC AATTTTGGAG CTTATTGTTA AAGAACCGCT GACCATTATT
TTCACCATAA CAACAATGCT TATTATCAGC ACGAAGCTGA CAATATTTGT ATTTATTTTT
ATTCCAATTT CCGGCTATAT TATTTCATTA ATTGGAAAAC AATTAAAAAA ACAATCTACA
AAAGCACAAG AAGAACAAGG TACTTTTTTA TCTACTATCG AAGAAACCGT TGGAGGATTA
AAAGTGGTAA AAGGCTACAA TGCTGAAGGC TATTTTAATA CTGTATTTCA AAATTCTACT
GAACGTTTTT TTAGCTTATC AAACAAAATA GGAAACCGTC AAAACTTAGC TTCTCCAGCA
AGTGAGTTTA TGGGAATCAC CGTAATTGCT ATTCTATTAT GGTATGGAGG ACAAATGGTT
TTGATTGACA AAACACTAAG CGGTCCTTCG TTTATTGCTT ACATGGGATT AGCTTATAAT
ATTTTAACTC CTGCAAAAGC CATTTCTAAA GCTTCATACG GAGTAAAAAG AGGAAATGCT
GCTGCCGAAC GTGTTCTTGA AATATTAGAA CAGGAAAACA CAATTACATC AAAAGAAAAT
GCAATCGAAA AAACATCTTT TGATTCTATT ATAGATGTGC AGCATGTTAA TTTTAAATAC
GAAGAAGAAA CTGTTTTAAA AGATTTTTCT CTTCAAATTA AAAAAGGACA GACTGTTGCA
CTTGTGGGGC AGTCTGGAAG CGGAAAAAGT ACAATTGCCA ATTTGCTGAC TCGTTTTTAT
GATGTAAACG AAGGTTCAAT TTCTATTGAC GGAATCAATA TTAAAGACAT GAATCTGCAA
TCGCTTCGCA GCTTAATGGG ATTGGTAACA CAAGACAGTA TTTTATTTAA TGACACCATT
AAAGCAAATA TTTCTTTAGG AAAATTAGAT GCAACTGATG ATGAAATTAT CGAAGCTTTA
AAAATTGCTA ACGCATATGA GTTTGTAAAA GAACTGCCGC TGGGAATCTA CACTAACATT
GGAGACAGCG GAAACAAACT TTCGGGCGGA CAAAAACAAC GTTTATCTAT TGCCCGTGCC
GTATTGAAAA ATCCGCCGAT AATGATTCTG GACGAAGCAA CATCAGCATT AGATACAGAA
AGTGAAAAAT TTGTTCAGGT TGCGCTCGAA AACATGATGC AGAACAGAAC ATCGATCGTA
ATTGCCCACC GACTTTCAAC GATTCAAAAG GCAGACGTTA TTGTTGTAAT GCAAAAAGGA
AAAATTGTAG AACAGGGAAC TCACGAAGAA CTGATTGCAC ACAACGGAAC TTACAACAAA
TTAGTAACGA TGCAGTCTCT AGAGTCATAA
 
Protein sequence
MSNFKKIVPF IYPYKKYAFL NIFFNVLYAL FSTLSFVALI PMLQVLFDQT KERKVKPVYE 
GILKLQQYGE DYLSYYITTT KGTHDPGYIL SIMVAIIISI FLLKNLADYL AMFFITFLRN
GVLKDMRNAL YKRTLELPLA FYSEKRKGDV ISRISADVNE VQNSFLAILE LIVKEPLTII
FTITTMLIIS TKLTIFVFIF IPISGYIISL IGKQLKKQST KAQEEQGTFL STIEETVGGL
KVVKGYNAEG YFNTVFQNST ERFFSLSNKI GNRQNLASPA SEFMGITVIA ILLWYGGQMV
LIDKTLSGPS FIAYMGLAYN ILTPAKAISK ASYGVKRGNA AAERVLEILE QENTITSKEN
AIEKTSFDSI IDVQHVNFKY EEETVLKDFS LQIKKGQTVA LVGQSGSGKS TIANLLTRFY
DVNEGSISID GINIKDMNLQ SLRSLMGLVT QDSILFNDTI KANISLGKLD ATDDEIIEAL
KIANAYEFVK ELPLGIYTNI GDSGNKLSGG QKQRLSIARA VLKNPPIMIL DEATSALDTE
SEKFVQVALE NMMQNRTSIV IAHRLSTIQK ADVIVVMQKG KIVEQGTHEE LIAHNGTYNK
LVTMQSLES