Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0099 |
Symbol | carB |
ID | 5090866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 102192 |
End bp | 105047 |
Gene Length | 2856 bp |
Protein Length | 951 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644739491 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_001192456 |
Protein GI | 146297865 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.217171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAG ACACATCAAT AAAATCAGTT TTAATAATAG GGTCAGGACC TATTGTTATT GGCCAAGCTT GCGAATTCGA TTATGCGGGA TCTCAATCTG CACGCTCGAT TCGTGAAGAA GGAATTGAGG TTATCTTGAT TAACTCGAAT CCAGCGACAA TTATGACCGA CCCATCTATG GCGGATCATA TTTATTTGAA ACCTTTAACG ACAAAATCGA TTATTGAAAT TCTTAAGGAA CATCCTCAAA TTGATGCTGT TTTACCAACA ATGGGAGGAC AGACAGCTTT GAACTTGTGT TTAGAGGCTG AAGAAAAAGG AATCTGGCAG GATTTTGGGG TAAGATTAAT TGGTGTTGAT GTAAATGCAA TTAATATTAC AGAAGACAGA GAGCAGTTTA AACAGCTTTT AGAAAAAATT AAAGTGCCAA CTGCACCTGC AAAAACAGCT ACTTCTTACC TTGAAGGAAA AGAAATTGCT CAGGAATTTG GTTTCCCGCT TGTTATTCGT CCTTCGTTTA CACTTGGAGG AACAGGAGCA GCAGTGGTTT ACAAAAAAGA AGATTTTGAT GAGCTTTTAA CTAGAGGTCT TGAAGCCTCT CCAATTCACG AGGTTTTAAT TGATAAAGCT TTAATGGGAT GGAAAGAATA CGAGTTAGAG CTTTTAAGAG ATAAAAATGA CAACGTTGTA ATTATCTGTT CTATCGAAAA CATGGATCCA ATGGGAATCC ATACTGGAGA TTCGATTACA GTTGCGCCTG CAATGACATT ATCTGATACA ACTTTCCAAA AATTACGTGA CTACGCTATC TTAATGATGA GAAGCATCGG AAACTTTGCG GGAGGATGTA ACGTACAATT CGCAGTTTCT CCAGACGAAA AAGAAGATAT CGTAGCAATC GAGATTAACC CTCGTGTGTC TCGTTCTTCT GCTTTAGCAT CAAAAGCTAC TGGATATCCA ATTGCAAAAA TTGCTTCTAA ATTAGCTTTA GGATACAATT TAGATGAATT ACAAAATCAA ATTACAAAAT CTACTTCGGC TCTTTTCGAA CCAACTTTAG ATTACGTAAT CGTAAAAATA CCACGTTGGA ACTTCGATAA ATTTGAAGGT TCAGACAGAA CTCTAGGTCT TCAGATGAAA TCTGTTGGTG AGGTTATGGG AATCGGACGT TCTTTCCAGG AAGCACTTCA TAAAGCAACT CAATCTTTAG AGATTAAGAG AAACGGTTTA GGAGCAGACG GAAAAGGATA TAAAGATTAC GAATTAATTA TCGATAAACT GACTCACGCA AGCTGGGATC GTGTTTTCGT AATTTATGAT GCAATCGCAA TGGGAATTCC GTTGAGCACC ATTCATGAAA TTACAAGAAT CGATATGTGG TTCTTGAAAC AATACGAAGA ACTTTACACT TTAGAAAAAG AAATCTCAAA CTACAAAGTT ACAGATCTTC CTAAAGAGTT ATTGCTTGAA GCGAAACAAA AAGGTTTTGC AGACAGACAA TTAGCGCACA TGATGAATTG TTTAGAAAGT GAAGTACACA CTTTGCGTAT GGAACAAAAA ATCAACCGTG TGTTTAAACT GGTTGATACT TGTGCGGCTG AGTTTAAAGC GCTTACTCCT TATTACTACT CAACTTTTGA GGCTGAAATT GAAAAAGCAA ACGGAGAGCG TTTTGTTGAC AACGAAAGTA TCGTAACAGA TAAAAAGAAA GTAATCGTTT TAGGTTCCGG ACCAAACAGA ATTGGACAAG GAATTGAGTT TGATTACTCT TGTGTACACG GCGTTTTAGC AGCTAAAGAA TGCGGTTACG AAACGATCAT GATTAACTGT AATCCTGAAA CGGTTTCTAC TGACTTTGAT ACAGCGGATA AATTATATTT CGAACCAGTT TTCTGGGAGC ATATTTATGA CATCATCCAG CACGAAAAAC CAGAAGGTGT AATTGTTCAG TTAGGAGGAC AAACAGCTCT TAAATTAGCA GATAAACTTT CTAAATATGG TGTAAAAATT ATCGGAACTA GTTTCGACGC ACTAGATTTA GCAGAAGACA GAGGAAGATT CTCTGACTTA TTAACTGAGT TAAATATTCC TTTCCCAAGA TTTGGAATCG CTGAAACAGC TGACGAAGCT TCGAAATTAG CAGATACTTT AGATTTCCCA CTTTTAATTC GTCCTTCTTA TGTATTAGGA GGTCAGGGGA TGAAAATTGT AATCAACAAA AAAGAGCTTG AAGAGCACGT TATCGATTTG TTGAAAGCAA TTCCAGGAAA CAAATTATTA CTAGATCACT ACTTAGCGGG AGCAATCGAA GCTGAGGCAG ATGCAATTTG TGATGCTGAT GGAAATGTGT ATATCATCGG AATTATGGAG CACATTGAGC CTTGCGGTGT TCACTCTGGA GATAGTAATG CAACATTGCC TCCTTTTAAC TTAGGAGAAT TTGTAATGCA GCAAATTAAA GATCATACAC ATAAAATCGC CAGAGCTTTA AAAACGGTTG GTTTAATCAA TATCCAGTTT GCGATTAAAG ATGATACAGT TTACATTATC GAGGCAAACC CAAGAGCCTC TAGAACGGTT CCTTTTATTG CAAAAGCTTA CGGAGAACCT TATGTAAATT ACGCTACAAA AGTAATGTTA GGTCACAATA AAGTAACTGA CTTTGATTTT AACCCGCAGT TAAACGGATA TGCAATCAAA CAACCAGTAT TCTCTTTCAG TAAATTCCCG AATGTAAACA AAGCGTTAGG GCCAGAAATG AAATCAACAG GAGAAAGCAT CTTGTTTATT GATGACTTAA AAGATGATCA ATTCTATGAA TTGTACTCTA GAAGAAAAAT GTATTTGAGT AAATAA
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Protein sequence | MPKDTSIKSV LIIGSGPIVI GQACEFDYAG SQSARSIREE GIEVILINSN PATIMTDPSM ADHIYLKPLT TKSIIEILKE HPQIDAVLPT MGGQTALNLC LEAEEKGIWQ DFGVRLIGVD VNAINITEDR EQFKQLLEKI KVPTAPAKTA TSYLEGKEIA QEFGFPLVIR PSFTLGGTGA AVVYKKEDFD ELLTRGLEAS PIHEVLIDKA LMGWKEYELE LLRDKNDNVV IICSIENMDP MGIHTGDSIT VAPAMTLSDT TFQKLRDYAI LMMRSIGNFA GGCNVQFAVS PDEKEDIVAI EINPRVSRSS ALASKATGYP IAKIASKLAL GYNLDELQNQ ITKSTSALFE PTLDYVIVKI PRWNFDKFEG SDRTLGLQMK SVGEVMGIGR SFQEALHKAT QSLEIKRNGL GADGKGYKDY ELIIDKLTHA SWDRVFVIYD AIAMGIPLST IHEITRIDMW FLKQYEELYT LEKEISNYKV TDLPKELLLE AKQKGFADRQ LAHMMNCLES EVHTLRMEQK INRVFKLVDT CAAEFKALTP YYYSTFEAEI EKANGERFVD NESIVTDKKK VIVLGSGPNR IGQGIEFDYS CVHGVLAAKE CGYETIMINC NPETVSTDFD TADKLYFEPV FWEHIYDIIQ HEKPEGVIVQ LGGQTALKLA DKLSKYGVKI IGTSFDALDL AEDRGRFSDL LTELNIPFPR FGIAETADEA SKLADTLDFP LLIRPSYVLG GQGMKIVINK KELEEHVIDL LKAIPGNKLL LDHYLAGAIE AEADAICDAD GNVYIIGIME HIEPCGVHSG DSNATLPPFN LGEFVMQQIK DHTHKIARAL KTVGLINIQF AIKDDTVYII EANPRASRTV PFIAKAYGEP YVNYATKVML GHNKVTDFDF NPQLNGYAIK QPVFSFSKFP NVNKALGPEM KSTGESILFI DDLKDDQFYE LYSRRKMYLS K
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