Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0055 |
Symbol | |
ID | 5094141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 60603 |
End bp | 61103 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739447 |
Product | TPR repeat-containing protein |
Protein accession | YP_001192412 |
Protein GI | 146297821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACC TACTAGTACT ATCATTTATT ATGATAAGCT TTTCGTCGTG GTCGCAAACC GCAGCGATTT ATTTTAACAA AGCTTTTAAT AAAGCTGCAG CCGGAAATTA CAAAAGTGCA ATCGCCGATT ACACAAAAGC CATCAGCAAG GATTCTAAAT TTGTTGAAGC TTATCAAAAT CGAGGCGTTG CAAAATTCAA ACTAAACGAT TTAAAAGGCG CCATGTCTGA TTTTAACAAA ACAATCGAAT TAGACAATAT GAATGCCGAT GCTTTTACTG GCCGTGCCAA TGTAAACTTT AAACTATCAA ATTTTAAAGA AGCAATTAGT GACTGCACCT CTTGTCTTGA TTTAAACCCA AGAGACTATG TTGCCTATAA CTTAAGAGGT TTGGCTTATA ACAACATTGG AGACAAGAAA AATTCATGCA AAGATTTTTC AAAAGCAATC GAATTAGGAA GCCAAAGCGC CATAAAAAAC AGAAACTCAT TTTGTAAATA A
|
Protein sequence | MKNLLVLSFI MISFSSWSQT AAIYFNKAFN KAAAGNYKSA IADYTKAISK DSKFVEAYQN RGVAKFKLND LKGAMSDFNK TIELDNMNAD AFTGRANVNF KLSNFKEAIS DCTSCLDLNP RDYVAYNLRG LAYNNIGDKK NSCKDFSKAI ELGSQSAIKN RNSFCK
|
| |