| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0052 |
|---|
| Symbol | |
|---|
| ID | 5091034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 58048 |
|---|
| End bp | 58548 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644739440 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_001192409 |
|---|
| Protein GI | 146297818 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA ACATCATCTT AACAAATCAG GAAATCGAAC ACAAAATAAA ACGTATCGCT
TATCAAATCT ACGAAACCTT TGTTGACGAA GAAGAAGTTG TAATTGCAGG AATCGCATCT
AATGGTTCTG TTTTTGCTCA AAAACTAGCA GAATCTTTAC GCACAATTTC AACATTAAAA
GTTTCTCTTT GCGAAGTCAA AATTGACAAA CAAAACCCAC AGTCCCCTAT TCAGACTTCT
TTAAGCAAAG AAGATTATAA AAATAAAGGA CTTGTGCTGG TTGATGATGT ATTAAACTCA
GGAACTACTT TAATTTATGC TGTCCGCCAT TTCCTTGACG TTCCGCTTAA GAAATTCAAA
ACAGCAGTAC TTGTTGACAG AAATCATAAA AAATACCCTG TAAAAGCAGA TTTTAAAGGA
ATCTCTTTAT CAACTTCTTT ATTAGAACAC GTTCAGGTTG TTTTTGATGA AAACGGAGAC
AATTATGCTT TTCTAAGCTA A
|
|---|
| Protein sequence | MSKNIILTNQ EIEHKIKRIA YQIYETFVDE EEVVIAGIAS NGSVFAQKLA ESLRTISTLK
VSLCEVKIDK QNPQSPIQTS LSKEDYKNKG LVLVDDVLNS GTTLIYAVRH FLDVPLKKFK
TAVLVDRNHK KYPVKADFKG ISLSTSLLEH VQVVFDENGD NYAFLS
|
|---|
| |