| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0038 |
|---|
| Symbol | |
|---|
| ID | 5091020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 44795 |
|---|
| End bp | 45385 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 644739426 |
|---|
| Product | histidine kinase, dimerisation and phosphoacceptor region |
|---|
| Protein accession | YP_001192395 |
|---|
| Protein GI | 146297804 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.238676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCC ACTCAATACC AGAAAAAGAG CTTGTCGCTA TAATATTATA TATATCACTT
TTCTTTATAA TCGTTTCAGT CGTACTGATC GTATTTTTCT ACTTCTCAAG AAAAAAAATC
ATTCAAAAAG AATTAGAAAA GAAAGATTTA ATACTTCAGT ATCAAAAAGA ACAATTACAT
GCTGTTTTGC AGATACAAGA AGAAGAACGC AAACGTATTG CTCAGGATCT TCATGATGAT
ATTAGTTCTA AACTTAATAT TGTTTCCTTA AATACACACT TGTTGTCAGC GCCAAATTTA
ACAGAAGCTG AAACAACTGA AATTACAGAG AACATTATAA ATTTAACAGC AAAAGCTTTA
GAAAATTCAA GGAAAATTGC GCATAATTTA TTACCTCCGG TTTTCGAAAA GTTTGGACTT
CATGCAGGTA TAGAAGAATT ATGCGGGGAA TTTGAGAGTA GTAAATCAGT AAAAACCTAT
TATAAAAACG AACTTGATTT TGATGATAAA GAAATCGATC GTCATTTGCA TGTTTTTAGG
GTTTTACAAG AACTAATGAA TAATTCTCTT CGTCATGGAA AGTCTAATTA A
|
|---|
| Protein sequence | MNTHSIPEKE LVAIILYISL FFIIVSVVLI VFFYFSRKKI IQKELEKKDL ILQYQKEQLH
AVLQIQEEER KRIAQDLHDD ISSKLNIVSL NTHLLSAPNL TEAETTEITE NIINLTAKAL
ENSRKIAHNL LPPVFEKFGL HAGIEELCGE FESSKSVKTY YKNELDFDDK EIDRHLHVFR
VLQELMNNSL RHGKSN
|
|---|
| |