Gene Fjoh_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0030 
Symbol 
ID5091012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp35107 
End bp36825 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content28% 
IMG OID644739418 
Productputative signal transduction histidine kinase 
Protein accessionYP_001192387 
Protein GI146297796 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.11045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAA AAAATGTCCA TTTTTACTGC TTTCAAGCTA TTATTTTAGT TCTTTTTTCA 
TGCCAAAAAA AGGAACCTAA ATTTGACGCT TCTAACAATG AAAAGCCAAA AATTGCCGCT
CTTACAAAAA AAGCAGAGTT CTTTATTGAG AAGAAAAAAA CTGATAGTGC CTTCTATTAT
TATAATGAAG CAAAATCAAT CTGCGATCCG TTAACATATC CTGACACATA TGTTGTCACC
CTAAATTCTA TGGCCGTTAT ACAGCAGAAT CAAAATGATT TTGTTGGCAG TAAAACTACA
CTAAAAGAAG CTCTGCCTTT TTTAACACTC ATAACTAATT CTAAACATAT TTGGGATACT
TATTCAGTTT TAGGGGTTAA TTACTTAAAC ACATATCAAT TCAGAAAAGC TGAGAAATAT
TTCAAAAAAG CTTTAGAACT AAATATCGAT GAGTTTACAA ATATTGAATC ACAAAAAAAT
ATAGCCGAAG TTTTTATAGC TGAAAACAAA CACCAAGAAG CAATACAGAT TTTATTATTA
CTTATAGATA AAAAGGAGGT AAAAGATAAC CCAAAAACTC ATGCCGAGAT ACTGGACAGA
ATTGGATATT GTTATTACTT ATCAAGCAAT TCTGAAGCAT ATACTTTTTT AAATGATGCT
TTACAAATAC GAGTGCAGCT AAAAGATCCT CTTGAAATTG CCAAAAGCAA TTACAACTTA
GCTCTTTTTT ATGAAAATAA AAATCCTCTT TTGGCAAAAA AATATATGAA AACAAGTTAT
GAGAAATATA TTTTAGCTAA GAATGTTGAT GGGAGGCTTT CTGCACTTAA ACTCATAATG
AACAACAGTC AGAATACAGA ACTCAAACAG CATTCAATTA AATATATAGA TTTAGTAGAC
AGCATATATG AAGTACGTCA AAAAGCGAAA AACTTATTTG CCAAAATCAA GTATAACTCT
AAGAAAGAAA AAGAAGAAAA TCTAATACTT AAAACCAATA AAGCAGAAAA TGAACTCCAA
TTAGAAAAAC AAAAAATAAG AAACATCATT CTATATCTTA TTATTCTGCT AAGTCTAAGT
TTGATTTTAG TATTGTATTT CTTTTTAACT TCTAAAGCTA ACAAAGATAA AATAGAGGCC
AGTTATAAGA TTGAAACAAA AATCGCAAAG AAATTACATG ATGAATTAGC AAATGATATC
TATCATACGA TGGCTTTTGC TGAGCATAAA AATCTATCGC TTGCAGAAAA TAAACAGCAG
TTATTAAACA GTCTTGATGC TATTTACTAC AGAACAAAAG ACATTTCTAA AGAGAATAAT
TATAGAATAA CAGATGAAAA CTATGTTTCT CATCTAAAGA AAATGATTTC AAGTTTTAAC
ACGCCTTTTA TTAATATTAT CATAAATGGC TTAGATTCTA TTTTCTGGGA AGATATTGAC
CAAAACAAAA AGAAAACGAT TTATAGAATA TTACAAGAAT TACTTGTAAA TATGAAAAAA
CACAGTAATG CATCTGTCGT AGGAATCAAT TTTAAAACAG CAAAAAAGGA TATTATAATT
CATTATTATG ATAATGGAAA GGGTGTAGAC AATCAAGATA TTATTTTTAA AAACGGCTTA
CATAATATCG AAAATCAAAT TCTCCATCTT AAAGGAGAAA TGCAAATAGA TTCGGCAGCA
GGTAAAGGAT TTAAACTAAC TTTTAAGTTT TCTCGATAA
 
Protein sequence
MMLKNVHFYC FQAIILVLFS CQKKEPKFDA SNNEKPKIAA LTKKAEFFIE KKKTDSAFYY 
YNEAKSICDP LTYPDTYVVT LNSMAVIQQN QNDFVGSKTT LKEALPFLTL ITNSKHIWDT
YSVLGVNYLN TYQFRKAEKY FKKALELNID EFTNIESQKN IAEVFIAENK HQEAIQILLL
LIDKKEVKDN PKTHAEILDR IGYCYYLSSN SEAYTFLNDA LQIRVQLKDP LEIAKSNYNL
ALFYENKNPL LAKKYMKTSY EKYILAKNVD GRLSALKLIM NNSQNTELKQ HSIKYIDLVD
SIYEVRQKAK NLFAKIKYNS KKEKEENLIL KTNKAENELQ LEKQKIRNII LYLIILLSLS
LILVLYFFLT SKANKDKIEA SYKIETKIAK KLHDELANDI YHTMAFAEHK NLSLAENKQQ
LLNSLDAIYY RTKDISKENN YRITDENYVS HLKKMISSFN TPFINIIING LDSIFWEDID
QNKKKTIYRI LQELLVNMKK HSNASVVGIN FKTAKKDIII HYYDNGKGVD NQDIIFKNGL
HNIENQILHL KGEMQIDSAA GKGFKLTFKF SR