Gene Fjoh_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0016 
Symbol 
ID5090998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp14542 
End bp15576 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content32% 
IMG OID644739399 
Productaminodeoxychorismate lyase 
Protein accessionYP_001192373 
Protein GI146297782 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTAA AGAAAATTAT CACGATAACT GCTGTAGCCG TAATTTCTGT TCTTCTGATT 
TACGGTTTTA TTTTAATCAG CCAAATTTTT AGTGCCAATA CAAAATTTGA AGAAAAAGAA
GTTTACGTTC ATGTTCCTAC AGGGGCAAAT TACAGTGACG TAAAAAAAAT ATTAGAACCT
TATATCAAGA ATTTTGACAA TTTTGAATTA GTTGCCAATA AAAGAAGTTA CCCTGAAAAT
GTAAAATCTG GTCGTTTTCT TCTTAAAAAA GACATGAACA ATATTGATTT AGTTCGTGCA
ATGCGTTCTA ATGTTCCGGT TAAATTAGCG TTTAACAATC AGGAGCGCTT AGAAAATTTT
GCAGGCAGAG TAGGTTCTGA AATAGAAGCA GACAGTTTAT CTTTATTGAA AGCTTTTAGA
GATCCTAAAT TTTTATCAGA CAACGGATTT AACGAAGAAA ATGTTTTTGC TATGTTTATC
CCTAATACGT ATGAAGTGTA TTGGAATACA TCTGCAGAAA AGTTCCGCGA TAAAATGATC
AAAGAATACC ATAAATTTTG GACTCCTGAA AGAATAGAAC AAGCAAAAAA ACAAGGCTTA
ACTCCAGTTC AGGTTTCTAT TTTAGCATCA ATTGTTCATA AAGAATCAGT TAAAAAAGAT
GAAAGACCTC GAATTGCAGG AGTTTATCTA AACCGTCTGC GTTTAGAAAT GCCATTACAG
GCAGATCCTA CTGTGATCTA TGCTTTAAAA TTAAGAGATA ATAATTTTGA TCAGGTTATA
AAAAGAGTTT TCTATAATGA TTTAGTTATG AAATCTCCAT ACAATACTTA TATAAATATC
GGACTTCCTC CGGGACCAAT CGCAATGGCT GATATTACTG CATTAGAAGC AGTTTTAAAT
CCAGAGAAAA ACGATTACAT ATATTTCTGT GCAAGTGTTG ATCGTTTTGG TTATCATGAA
TTTGCTTCAA ATTATGCAGA TCATACAAAA AATGCAAAAA AATACTCAGA CTGGGGATTG
CTAGTCAAGG TGTAA
 
Protein sequence
MKLKKIITIT AVAVISVLLI YGFILISQIF SANTKFEEKE VYVHVPTGAN YSDVKKILEP 
YIKNFDNFEL VANKRSYPEN VKSGRFLLKK DMNNIDLVRA MRSNVPVKLA FNNQERLENF
AGRVGSEIEA DSLSLLKAFR DPKFLSDNGF NEENVFAMFI PNTYEVYWNT SAEKFRDKMI
KEYHKFWTPE RIEQAKKQGL TPVQVSILAS IVHKESVKKD ERPRIAGVYL NRLRLEMPLQ
ADPTVIYALK LRDNNFDQVI KRVFYNDLVM KSPYNTYINI GLPPGPIAMA DITALEAVLN
PEKNDYIYFC ASVDRFGYHE FASNYADHTK NAKKYSDWGL LVKV