| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0007 |
|---|
| Symbol | |
|---|
| ID | 5091163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5133 |
|---|
| End bp | 5846 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644739390 |
|---|
| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
|---|
| Protein accession | YP_001192364 |
|---|
| Protein GI | 146297773 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC TCGGAAAATT ATATCTTATT CCAACTACAA TGGGCGAAAG CGATCCGATG
GATGTTTTAC CACAAACGGT AAGAAGAACG ATAGAAGTTA TCGACCATTA TATTGTTGAA
AACGATAAAA CAGCCAGAAA ATCTATAAAA GCCGTTTATC CAGAAAAAAA ACAATCTGAA
CTTGTTCTTT TTACTTTAAA CAAACGAACA GAACCAAGCG AACATTTAGA TTTTATAAAA
CCTTTATTAG AAGGTAAAAA TATGGGATTA ATGAGCGAAG CCGGATGTCC GGGCGTTGCT
GATCCTGGTG CCGTAATTGT AAAATTGGCA CATGAAAAAG GGATTCAGGT TGTTCCGTTA
GTCGGCCCCT CTTCCATTTT ACTAGCGATG ATGGCTTCTG GAATGAATGG CCAGAGTTTT
ACTTTCAACG GATATCTACC AATTGACAAA GACGAAAAAA AATCGGCAAT ACGTCATTTT
GAGAGATTAT CTCAGGACAA AAACCAATCA CAGTTATTTA TTGAAACACC TTATAGAAAC
AATAAATTGA TCGAAGATCT TTTACAGATT TTAAATCCGT CGACACATTT ATGTATTGCT
ACAGATATTA CACTGCCAAC GGAATTCATA AAAACCTTGA AAGTTTCGGA TTGGAAAAAA
TTGAAAATCG ATATTGACAA ACGACCAACT ATTTTTATTA TTCATAAAAT CTAA
|
|---|
| Protein sequence | MKLLGKLYLI PTTMGESDPM DVLPQTVRRT IEVIDHYIVE NDKTARKSIK AVYPEKKQSE
LVLFTLNKRT EPSEHLDFIK PLLEGKNMGL MSEAGCPGVA DPGAVIVKLA HEKGIQVVPL
VGPSSILLAM MASGMNGQSF TFNGYLPIDK DEKKSAIRHF ERLSQDKNQS QLFIETPYRN
NKLIEDLLQI LNPSTHLCIA TDITLPTEFI KTLKVSDWKK LKIDIDKRPT IFIIHKI
|
|---|
| |