| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0001 |
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| Symbol | |
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| ID | 5091988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 96 |
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| End bp | 1145 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644739384 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001192358 |
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| Protein GI | 146297767 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.279775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAC ATGAAAAATA TATAAAACGA TGCATAGAGC TTGCTAGAAA TGGCTTTGGA
ACAACATATC CAAATCCGAT GGTGGGAAGT GTAATTGTTT ATGAAGATAC TATTATTGGC
GAAGGCTGGC ATAAAAAAGC CGGTGAACCG CACGCCGAAG TAAATGCAGT TCGATCTGTA
AAAGACAAAT CGTTATTAAA AAAAGCTACA ATTTATGTCA GCTTAGAACC TTGCTCCCAT
TTTGGAAAAA CACCTCCTTG CTGTGATTTG ATTATTGCAA ACAAAATTCC AAATGTGGTT
GTAGGAACGG TCGATCCAAA TGAAAAAGTA GCAGGAAGAG GAATTAAAAA ACTAATTGAA
GCCGGTGCCA ATGTTGTGGT TGGAATTTTA GAAGATGAAT GTAACGAACT CAACAAACGT
TTTTTTACAT TCCACCAGAA AAAACGACCG TATATTATTT TAAAATGGGC TGAAAGTCTG
GACGGATTTC TCGCTCCTGA AAAAGAAATC GATCAGGAAA GAAAACCAGT TTGGATTACC
AATCAATATT CACGTCAATT AGTCCATAAA TGGCGAAGTG AAGAACAGGC TATTTTAGCA
GGAACTCAGA CGGTTGTTGA CGACAATCCG AAATTAAACG TCAGAGATTG GTCAGGAAAT
AATCCGGTCA GAGTAATTTT AGATCAAAAC AACCGAATTT CTAAAGACAG TTTTGTTTTT
GATGAAAGTG TAAAAACTAT TGTTTTTACG AAATCTGAAA ACATGATTTC GACAGAAAAT
ACGATTTTTG AAAAAATTGA TTTTGATAAA AATAGTATTG AAAATATTTT AGCTGTTTTA
TACCAGCATC AAATTCAATC TATAATTATT GAAGGAGGCA GACAGACTTT AGAATCTTTT
ATAAATGAAA ACATTTGGGA TGAAGCCCGA ATATTTATTG GAAAAAACAC TTTTAAAAAA
GGAACTAAAG CTCCGGAACT TCAAAAACAA AATGCCATTA AAACTTATAT TCAAAACGAC
GAATTAATAT ATGTAAGAAA TCATGATTGA
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| Protein sequence | MNKHEKYIKR CIELARNGFG TTYPNPMVGS VIVYEDTIIG EGWHKKAGEP HAEVNAVRSV
KDKSLLKKAT IYVSLEPCSH FGKTPPCCDL IIANKIPNVV VGTVDPNEKV AGRGIKKLIE
AGANVVVGIL EDECNELNKR FFTFHQKKRP YIILKWAESL DGFLAPEKEI DQERKPVWIT
NQYSRQLVHK WRSEEQAILA GTQTVVDDNP KLNVRDWSGN NPVRVILDQN NRISKDSFVF
DESVKTIVFT KSENMISTEN TIFEKIDFDK NSIENILAVL YQHQIQSIII EGGRQTLESF
INENIWDEAR IFIGKNTFKK GTKAPELQKQ NAIKTYIQND ELIYVRNHD
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