Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2274 |
Symbol | |
ID | 5104226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2175106 |
End bp | 2175624 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640508171 |
Product | PUA domain-containing protein |
Protein accession | YP_001192336 |
Protein GI | 146305020 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.112054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA GCAGATACAG GCAATTTGTC ACAGAACCGG AGGACGCACT CCCCTATCTT GAAGTGTTAA AGGCAATAGC CGATTACCAG TTCGGAATAG GCATAGGTAA CTGTTTATTT GATCAGGACT CGTTCAGGAT TCAGCGTTCT GTAAACACGT GGCGTATTAG GAACGTTCTT TCCAAGGACG GTTTGTTCTT GGTGTTAAGA CCACAGGACG GGCTTTTCTC CTTAACCATA AACGCTGGGA GGAGACTTAA GGAATGCGCT CCCTTTCCCA GTCTAAGGGT AATGGTAAGA AAAGAAGTGG AAGACGCAAT ACTGAAGGAG GGGAATGTTT TCGCTAAACA CGTGGAGAAC GTGGACAGGA AGTTAAGAGC TGGTGATGAG GCCCTAGTTG TGAATGGAGA TGATGAGTTA CTGGCAATAG GAAAAATGAG ATTGTCAGGC GAGGAAGTAA TGGAATATAA AAGGGGAGTA GCATTAACAG TTAGGGAGAG GTGGAAGATA CGAAAGTAA
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Protein sequence | MSQSRYRQFV TEPEDALPYL EVLKAIADYQ FGIGIGNCLF DQDSFRIQRS VNTWRIRNVL SKDGLFLVLR PQDGLFSLTI NAGRRLKECA PFPSLRVMVR KEVEDAILKE GNVFAKHVEN VDRKLRAGDE ALVVNGDDEL LAIGKMRLSG EEVMEYKRGV ALTVRERWKI RK
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