Gene Msed_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2274 
Symbol 
ID5104226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2175106 
End bp2175624 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID640508171 
ProductPUA domain-containing protein 
Protein accessionYP_001192336 
Protein GI146305020 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.112054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGA GCAGATACAG GCAATTTGTC ACAGAACCGG AGGACGCACT CCCCTATCTT 
GAAGTGTTAA AGGCAATAGC CGATTACCAG TTCGGAATAG GCATAGGTAA CTGTTTATTT
GATCAGGACT CGTTCAGGAT TCAGCGTTCT GTAAACACGT GGCGTATTAG GAACGTTCTT
TCCAAGGACG GTTTGTTCTT GGTGTTAAGA CCACAGGACG GGCTTTTCTC CTTAACCATA
AACGCTGGGA GGAGACTTAA GGAATGCGCT CCCTTTCCCA GTCTAAGGGT AATGGTAAGA
AAAGAAGTGG AAGACGCAAT ACTGAAGGAG GGGAATGTTT TCGCTAAACA CGTGGAGAAC
GTGGACAGGA AGTTAAGAGC TGGTGATGAG GCCCTAGTTG TGAATGGAGA TGATGAGTTA
CTGGCAATAG GAAAAATGAG ATTGTCAGGC GAGGAAGTAA TGGAATATAA AAGGGGAGTA
GCATTAACAG TTAGGGAGAG GTGGAAGATA CGAAAGTAA
 
Protein sequence
MSQSRYRQFV TEPEDALPYL EVLKAIADYQ FGIGIGNCLF DQDSFRIQRS VNTWRIRNVL 
SKDGLFLVLR PQDGLFSLTI NAGRRLKECA PFPSLRVMVR KEVEDAILKE GNVFAKHVEN
VDRKLRAGDE ALVVNGDDEL LAIGKMRLSG EEVMEYKRGV ALTVRERWKI RK