Gene Msed_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2273 
Symbol 
ID5104225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2174399 
End bp2175124 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content42% 
IMG OID640508170 
Producthypothetical protein 
Protein accessionYP_001192335 
Protein GI146305019 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.222464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGATA CGAAAGTAAT TCTGAAAGAC GTCTCAGAGA GCGAGCTGGC CAATTCCAGA 
TTCATCTCAG GTTTCAGGAC CCTAGGTGAG GTTGGTTACC TATCAGTGAG GCATATTGTT
CTATCAAGAA AGATGAGAAG GGTAGGGTTT GTGACCACGA AATACCTTAG GGATGTTACT
TTTCTTGATG ACTATGGAGT TGCCACACCC TTTGAGTTAT TTTATGATGA GGAGTTCAGG
GTTCTAGTAC TCTTAAATCA TCTGCTCCCA TTTCAAAGGG AGTGGAGTAG CTTCACTCAT
GGCCTAGTTA AATGGTTAAA GAGGATACAG GTGAAGGACT CCATTCTAAT AGGAGGCTTA
GATAAGAGGT ATAAGGACGT TAATGAGCCC ATAAAGTGGA TGAGGACCAG CAAAAGCACA
ATTGATTTAC CCTATCCCAC TCTTAACAAA CAGTTAATCA TGGTAGGACC ACTGGCCCTG
TTTACAGTTT ACGCAGAAAT AGAGGATCTT CCAGCAACTA TTCTACTTCC GTATGCGGAT
AGGGAGAGAT TAGATCCAGG AGCAGCTGCT GTGGCAGTAG ATGTAATAAA CAAACTAATT
GGGTTCAATA TAGATACAAG AGAGCTTTAC GAGGATGCCA AGAAAATAGA GCAGGAACTC
CAAAGGCAGC TTGAAATGAT ACAAAAGGAA ATTTCAAAGA GTGGGGTTGA TAGACATTAT
ATGTGA
 
Protein sequence
MEDTKVILKD VSESELANSR FISGFRTLGE VGYLSVRHIV LSRKMRRVGF VTTKYLRDVT 
FLDDYGVATP FELFYDEEFR VLVLLNHLLP FQREWSSFTH GLVKWLKRIQ VKDSILIGGL
DKRYKDVNEP IKWMRTSKST IDLPYPTLNK QLIMVGPLAL FTVYAEIEDL PATILLPYAD
RERLDPGAAA VAVDVINKLI GFNIDTRELY EDAKKIEQEL QRQLEMIQKE ISKSGVDRHY
M