| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2269 |
|---|
| Symbol | |
|---|
| ID | 5104221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 2171018 |
|---|
| End bp | 2172067 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640508166 |
|---|
| Product | translation initiation factor 2B subunit I |
|---|
| Protein accession | YP_001192331 |
|---|
| Protein GI | 146305015 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
|---|
| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAAGC TCAGTGACAT AGTTCCCTTA AAATTCGAAA ATGGAAAGGT AGTGTGGCTG
AACACTAGTG CTATACCATG GAAAGAGGAG TATAAGGAAT CATCAAACTA CGAGGATATT
GCAAGAGCCA TAGAGACCAT GGAAGTTAGG GGTGCCCCAG CAATAGGGGT AATGGCCGCG
TTGGGTATAG CTGCAGCTGT TTATAATTCC CAGGGAGATG TCCAGACCTT ATATCAAGTA
TTGAACAGGG CAGCGGAGAG GCTTAGTAGG ACCAGACCCA CGGCTTACAA CCTTTTCTGG
GCTATAGATA GAATGAGAGC TAAGGCAAAC TCTCTGATTT CGGACAACGT ATCTCCGGAG
GAATTCAAGG AGAGGATAGT CGAAGAGGCT TTGAGAATTC AGAGGGAGGA TATTGAGATC
AATAGGAGAA TGGGAGAAAT AGGTAGCCAA GTGATAAAGG ACGGAGACGT CATCCTTACC
CACTGCAACA CTGGATCCCT CGCTACTGCC GGCTTTGGTA CAGCCCTTGG AGTTATAAGG
ACAGCTTGGT TGCAGGGAAA GTCTATCAGG GTTATTGCTA CCGAGACTAG ACCATTGTTG
CAGGGTGCTA GGCTAACTAT GTGGGAGTTA ACCAAGGACG GTATTCCCTC AAAACTTATC
ACTGATAACA TGGTTGCATA TGCCATGAGG TATGAAGGGG TTACGAAGGT GATTTTGGGC
GCAGATAGAA TACTAGTTTC TGGCCATGTA GCCAATAAGA TAGGTACATA TGGAATTTCT
ATTCTAGCAA AGTATCATGG CGTAGATTTC TACGTTGTCG CTCCAACCAG TACAATTGAT
AGAACTGGAG CTAATGAGAT TGTGATTGAA AGGAGGAAAC CAGACGAGGT AAGGACTGTA
TTAAACATGG TAGATATAAC TGTGAAGGAT GCGGAAGTTC TAAATCCAGC CTTTGATGTG
ACACCACCGG AACTTATAAC TGGTATTATT ACAGAAAAAG GGATAGCATA TCCGCCATTT
AAGGATAGTT TAAAGAAATT TATTGAGTAA
|
|---|
| Protein sequence | MRKLSDIVPL KFENGKVVWL NTSAIPWKEE YKESSNYEDI ARAIETMEVR GAPAIGVMAA
LGIAAAVYNS QGDVQTLYQV LNRAAERLSR TRPTAYNLFW AIDRMRAKAN SLISDNVSPE
EFKERIVEEA LRIQREDIEI NRRMGEIGSQ VIKDGDVILT HCNTGSLATA GFGTALGVIR
TAWLQGKSIR VIATETRPLL QGARLTMWEL TKDGIPSKLI TDNMVAYAMR YEGVTKVILG
ADRILVSGHV ANKIGTYGIS ILAKYHGVDF YVVAPTSTID RTGANEIVIE RRKPDEVRTV
LNMVDITVKD AEVLNPAFDV TPPELITGII TEKGIAYPPF KDSLKKFIE
|
|---|
| |