| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2266 |
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| Symbol | |
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| ID | 5104218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2168559 |
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| End bp | 2168933 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640508163 |
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| Product | tRNA-splicing endonuclease subunit beta |
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| Protein accession | YP_001192328 |
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| Protein GI | 146305012 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.87026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATG CTTTTGAGGA ACTGATGGAC TTCCTTTCAA AGGGTGACAT CGAAGAAGCA
ATAACGCGTG CTAGACTACT CGAGAAAAAT GATAAATCTG CATGGAATAA ATTCGTTGTA
TATCTAGATC TGAGAACAAA AGGAAAGAAG GTTTCTATTT CCAATATAGG TCCTAGTTTG
GGAATTTTAG ACAGAAACAA CAAATTAGTT GCTTTGGTAC TAGTCATATC AGAAAATGAG
TCAATAGATA TGGAAAAAAT TATTGATCTA GTAAAGTTTG CGAAATCGAT GAGAATGGAA
ATTTTCATGG CACTCGTCGA TAAATACGGA GATATAACAT ATTATACCCT CGAAGAAATC
AACTTAACGA AGTGA
|
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| Protein sequence | MSNAFEELMD FLSKGDIEEA ITRARLLEKN DKSAWNKFVV YLDLRTKGKK VSISNIGPSL
GILDRNNKLV ALVLVISENE SIDMEKIIDL VKFAKSMRME IFMALVDKYG DITYYTLEEI
NLTK
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