| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2265 |
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| Symbol | |
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| ID | 5104217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2167866 |
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| End bp | 2168453 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640508162 |
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| Product | zinc finger TFIIB-type domain-containing protein |
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| Protein accession | YP_001192327 |
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| Protein GI | 146305011 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.902084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATA TCAGGTGTAG CTATTGCGGT TCCAAGAATC TGATATGGGA TTATACAAGA
GGGGAAGTGG TCTGCGGGGA CTGTGGAACA ACTGCGGATA GAGTTTATGA TTACAGACCC
ATGTTCATGG AAGAGGTCTT GAGGTCGTCG CAAAACAGAA GTCTTCTATA TAAGAATCGC
GAAATAGAGT CATTCAAAGA ATTTATGCAC CTTTTGAAGA AATCTAGATT TCTAAGAAAG
TATAAAGGAG TTAAACTAAA TGTATCACTT AATCAAGGAT CTATTCAAGG ATCTAAGATT
TACTCTCAGA TTTCTCTAGA CGCCCTATAT AAGATTGAAA GTGATAAGGT AGCAATTAAA
ATATACAAAT ATCTTGAAAA GATGGGAATT TTTAGCGGAC TAAAGTTTAA GACAAGAGTA
TTATTGACAT ATTACCTTGT TTATGGTAAT GATAAAATAC GTATTAAAAG AATATTGAAA
ACATATTATA GTAGTGAAGA AAATATAAAG AGAATTATAA AGCAAATTCC TTTCAATGTA
AGACTTGAAA TAATGAGGAT GGTTGAGGAA TCCAAAATAA AAAATTAA
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| Protein sequence | MDNIRCSYCG SKNLIWDYTR GEVVCGDCGT TADRVYDYRP MFMEEVLRSS QNRSLLYKNR
EIESFKEFMH LLKKSRFLRK YKGVKLNVSL NQGSIQGSKI YSQISLDALY KIESDKVAIK
IYKYLEKMGI FSGLKFKTRV LLTYYLVYGN DKIRIKRILK TYYSSEENIK RIIKQIPFNV
RLEIMRMVEE SKIKN
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