Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2263 |
Symbol | |
ID | 5104215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2164325 |
End bp | 2165926 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640508160 |
Product | ATPase-like protein |
Protein accession | YP_001192325 |
Protein GI | 146305009 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.539345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTCAA GACTCCCACC CATTCTACTC ATTTTGATTG GGTTACTAAT ACTTCTTAGT TCTCTGATTC ATTTTCAGTT AATATACGTT GTATTACCTT TGATTCCCAT AATTTTAGTG GCAATTCTTT CTAGGATAAA GAAAGTTACA ACGCTGAGTA GTAGAATCTT TGACAAGCAG AACGTGTTCG AAATACAGTC AAATAATCGT ACTTTCACGG GAATTATGCT CAAATTAAAT GGAAAGATTG AACTAAATAA AGAGAATATC AACTTTCAAA GAGAATTGGA ATCTCTTATG GAGACCTTAG GTAGGAGAGA TGTTGGATTT GAGTATTATG TTATAACGAG CTTATCGAAA AAGAGGACAT CATCATCCTT AATAGTATTA AAAGAATGTA GCGATTGCAA GGAAGAAGTA ATTCAAGAGG TGCAAAATAT AAGAAACCTC TCAAACGCAA TTGCACCTCA CATACAGCTT GACGTAATTT CCTCCTCAGA GGTGGCTGTT CCATTGCCTA AAGGATGGGG GGATTTATCC TTTGCCAGGA TCTATGAACG TGTAATAGAC TCTCCAAAGA ATACCCTTCT TATAAACGAG TATGATGTGG ATCTAGGATC TATGAAAACT GAGGTTGCGG AGATTAAAAC CGGGATAAAG ATTAAAGACC TTACCAGACA TATTGCAATA TTTGGCACTA CAGGTAGCGG AAAATCTACA ACTGCTATAC TTCTCGCTAA AAAATTAATT AATAAAGGCA TTTCAGTTAC TATACTGGAT TGGCATGGGG AACATGTTGG AAAAATTCCA GACCTAAGGG TAGCAAACGT AGATAATCCT ATAAGAATTA ACCCGTTAAA ATTAGGTGAC ATAGAGGAAG TAGTGGAGAT TTTAGGAGAT GTTCTAAGAC TTACCGATCC ACAAAGATTT CTTCTGTATT CTGTTTTACT GAAAATGAGA AGAGCCAATA AATTCGACAT GAAAATGCTA ATTTCTATTC TCAGGAATAT AGAGGAAAGT AGCAATTGGA TGAGAGAAGT AAAATATGGT CTATTGAGGA AAATTTATCT ATTATTTACT AAGGAAGCTA AGCTGATATT TGACGATAAG ATAGATAATG CAAGAGTCGA GGAAACTCTT TTCAACTCTA TTGTTGATTT AAGCTTTATT AGGAACATTA GGCTCAGAAG AATATATGGT TTAATGATAA TCAAATTGAT GTCAGATTAT TTCATGAAGA GTAAACCCAT GGTCACTTCC CTCTTAATGA TTGAAGAGGC CCATAACTTC TTCGCCCATG ATAACGATTT CTTGGAAAAG CTCATTAGTG AGGTCAGAAA ATATGGTTTA GGGCTATGTG TCATTTCTCA GTCTCCCTCG TCAATATCTC CTGAAGTTTT GAAAAATACC AATATAAAAA TAATACATTC CATTAAGTCA GATACCGATA AAAGGATTTT AGCTGAAGCG TTGTCCTTAA CCCCTTCACT CTACGATAGT CTAGATAAGC TAGACGTAGG GGAGGCTCTA TTGTCATCAC CTAATATTAA GATACCTGTA GTCCTAAAAA TAAGAGAAGA AGATTCGAAA CAAACGAAAT AA
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Protein sequence | MWSRLPPILL ILIGLLILLS SLIHFQLIYV VLPLIPIILV AILSRIKKVT TLSSRIFDKQ NVFEIQSNNR TFTGIMLKLN GKIELNKENI NFQRELESLM ETLGRRDVGF EYYVITSLSK KRTSSSLIVL KECSDCKEEV IQEVQNIRNL SNAIAPHIQL DVISSSEVAV PLPKGWGDLS FARIYERVID SPKNTLLINE YDVDLGSMKT EVAEIKTGIK IKDLTRHIAI FGTTGSGKST TAILLAKKLI NKGISVTILD WHGEHVGKIP DLRVANVDNP IRINPLKLGD IEEVVEILGD VLRLTDPQRF LLYSVLLKMR RANKFDMKML ISILRNIEES SNWMREVKYG LLRKIYLLFT KEAKLIFDDK IDNARVEETL FNSIVDLSFI RNIRLRRIYG LMIIKLMSDY FMKSKPMVTS LLMIEEAHNF FAHDNDFLEK LISEVRKYGL GLCVISQSPS SISPEVLKNT NIKIIHSIKS DTDKRILAEA LSLTPSLYDS LDKLDVGEAL LSSPNIKIPV VLKIREEDSK QTK
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