| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2260 |
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| Symbol | rps17E |
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| ID | 5104212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2163447 |
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| End bp | 2163677 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640508157 |
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| Product | 30S ribosomal protein S17e |
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| Protein accession | YP_001192322 |
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| Protein GI | 146305006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1383] Ribosomal protein S17E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.252248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGTAATA TATATACGAG GGACATAAAG AGAATCGGTC AACAAATATA CGAGCTTTAT
AAAGACCAGA TTACCACTGA CTACGAGAAG AACAAAGAAT TAGTGAAACA GGTAGTTGAT
GTATATTCTA AGAAGGTTAG AAACAGGATA GCAGGATATA TAACCAGGAA GGCGAAACAA
GCAAGCAGAC CTGTTGAAGT CACCGAGCAA CAAGAAGAAT TAGAGGAGTG A
|
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| Protein sequence | MGNIYTRDIK RIGQQIYELY KDQITTDYEK NKELVKQVVD VYSKKVRNRI AGYITRKAKQ
ASRPVEVTEQ QEELEE
|
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| |