| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2258 |
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| Symbol | |
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| ID | 5104210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2160352 |
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| End bp | 2162154 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640508155 |
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| Product | putative ATPase RIL |
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| Protein accession | YP_001192320 |
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| Protein GI | 146305004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.306983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGGTTG CAGTCATTAA TTATGACTCC TGTAAACCCG ATAAATGCTC GATAGAATGT
GTTAGGTTCT GTCCCATAAA TAGGGCTGGG AGCAAGGCCA TAGAGATAGA TCAAAGCAAG
CTAGGTAAAC CCGTTGTCTA TGAGGAAACG TGTATTGGAT GTAACATCTG CGTAAAGAAG
TGTCCCTTTG AGGCGATATC CATAGTAAAT GTACCAGATA ATTTTAGTAA AGAAATTATC
CATAGATATG GAACTAATGG ATTTGAACTC TTTGGTCTTC CCATTTTAAA GAGCGGCTAC
GTTATAGGCC TCTTGGGCAA AAATGGAGCA GGTAAAACTA CCATACTGAA GATATTGAGC
GGCGAGATAA TACCTAATTT TGGGGAAGTC GAGAAACAAC CTAGTATAGA TACAGTCCTT
CAAAAATTTA AGGGAAAAGA ATTATTTTCC TATTTTTATG ATTTATATAA TAAAAAATTA
AGAGTAGTCC ATAAAATTCA GTATGTGGAA TATGCCTCCC GCTTGCTAAA GGGAGAGGTT
TCTCAACTTC TGAGGAAGGT AGATGAGCGA GGTAAACTAG ACGAGATAAG AGAACTGCTC
TTCATGAATT CCATTTGGAA TAAGGAAATT TCGACCCTCA GTGGAGGAGA ACTACAGAAA
ACGCTGATTG CGGCCGCCTT GGCCAGAGAG GCGAACGTTT ATGCCATAGA CGAGCCATCT
TCCTATCTAG ATGTCAGGGA AAGGATTAAC GTAGCTAAGG GAATAAGGGA ACTCACGAAG
GGAAAATACG TAGTTACCGT AGATCATGAT TTAATAGTCC TTGATTATAT TGCAGATTTT
GTCTCAATTA TTTATGGTGA AAGTGGAGTG TATGGAAAAG TATCAAAAAC ATATTCTACC
AGGGTTGGAA TCAACAACTT CCTTAACGGA TACCTCCCGG CTGAAAACAT GAGAGTTATG
GATCATAAGA TACAATTCTA TCTAAAGGAT GTTACAGATT TGGACTTAGC TAAAAACTCC
GCAGAGAAAG TGCGCTGGAG CAACATAACT AAGACCCTAG GAGATTTCTC ACTCAACACG
GAGCAAGGTT TCGCTAGAGA AGGTGAAGTC ATAGGAATCG TGGGTCCCAA CGGAATAGGT
AAAACGACGT TTATCAGAAT CCTGGTAGGG GAGATAGAAC CAGATTCGGG CTCTATCGTG
CCTACAGGAC TTACCTTATC CTATAAGCCA CAACGTATAG TTCCTGACTA CGAAGGAACT
GTGAGGGAAT ATCTAGAGTC GGTCAGTAAG GATATATTAT CTACTTCCTC TTGGTTTTAT
ACTGAGGTTA CGCGAAGACT TCGACTTCAT AAGCTCTTGG ACTCCAACGT TAAGGATCTT
AGCGGAGGAG AATTGCAGAA GCTCTACGTA GCGGGGGCTC TAGCCAAGGA AGCACATATA
TACTTGCTAG ACGAACCCTC CTCGTATCTT GACGTGGAAG AAAGGTACGT GGTAGCTAAG
GCTATAAAGA GGATTACAAG GGAAAGAAAG AGCGTTTCGT TCGTTGTAGA TCATGATCTC
GCTATCCACG ATTATATCGC CGATAGACTC ATTGTTTTCA CTGGAACTCC AGGTAAAAGT
GGTCATGCCA GCGAACCCCT ATCCTTGAGC AAGGGAATGA ATACGTTCCT TAAGGAAATT
GGGCTCACCT TCAGAAGAGA TGCTGAGAGC GGAAGACCTA GGGCAAATAA GATAGGAAGT
TACCTTGATA GGCTCCAAAG AGAAAGGAAC GAGTACTATT CTACAGAAAC TGTCGCGGAC
TAA
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| Protein sequence | MRVAVINYDS CKPDKCSIEC VRFCPINRAG SKAIEIDQSK LGKPVVYEET CIGCNICVKK
CPFEAISIVN VPDNFSKEII HRYGTNGFEL FGLPILKSGY VIGLLGKNGA GKTTILKILS
GEIIPNFGEV EKQPSIDTVL QKFKGKELFS YFYDLYNKKL RVVHKIQYVE YASRLLKGEV
SQLLRKVDER GKLDEIRELL FMNSIWNKEI STLSGGELQK TLIAAALARE ANVYAIDEPS
SYLDVRERIN VAKGIRELTK GKYVVTVDHD LIVLDYIADF VSIIYGESGV YGKVSKTYST
RVGINNFLNG YLPAENMRVM DHKIQFYLKD VTDLDLAKNS AEKVRWSNIT KTLGDFSLNT
EQGFAREGEV IGIVGPNGIG KTTFIRILVG EIEPDSGSIV PTGLTLSYKP QRIVPDYEGT
VREYLESVSK DILSTSSWFY TEVTRRLRLH KLLDSNVKDL SGGELQKLYV AGALAKEAHI
YLLDEPSSYL DVEERYVVAK AIKRITRERK SVSFVVDHDL AIHDYIADRL IVFTGTPGKS
GHASEPLSLS KGMNTFLKEI GLTFRRDAES GRPRANKIGS YLDRLQRERN EYYSTETVAD
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