| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2250 |
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| Symbol | |
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| ID | 5104311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2151638 |
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| End bp | 2152375 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640508143 |
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| Product | DNA polymerase sliding clamp subunit A |
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| Protein accession | YP_001192312 |
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| Protein GI | 146304996 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.151772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAG CCTATGCGAA CGCGATGGAC TTTAAGACCG TCATAGAGGC ACTCTCTAAG
CTAATTGACG AGGTTACCTT TACGTTCACC TCCTCTGGGC TAGACGTAGT TGCTGTGGAT
AGGGCTCATA TTTCACTAAT CAAATTACAT TTCCCCAAGG AAGCCTTTGA GGAATTCGAT
GTTGAGGATC AATTCAGATT TGGTTTCAAT ACCCAGTACA TGCTAAAGGT CATGGCTAGT
GCTAAGAGAA AGGAAAAGAT AGAGATGGAG TCTAGGGAAG AGTCAGAGAT AGTTATCAGA
ATGCTAGGAG AACCTCCTAG GGAATTCACT ATCAGAAATA TAGAAGTACC AATTCAGGAG
TTACCCGAGT TAAAGCTAGA TTTTGATGTA AAGGCTAAGA TAACATCTGG AGGCTTCAAG
AAGGCCGTTT CGGAAATAGC AACAGTAAGC GATTCGGTAG AAATAGATGC TACGGAGATG
GAAATCAAGC TAAGATCTAA GGAGTCTACC GAGATAGAGG TGGAGTTTTC GAAGGAGATG
GGGGGGTTGC AGGAAATAGA GGTGAAGAAA CCATCAGTCT CAAGCTATCC ATCAGATTAC
CTTGAGGATG TCCTAGTTCT AACTAGACTC TCAGGTTTCC TTAACCTCCT TTTCTCGGAA
CAGAAACCAC TACAGTTAGA ATTTAATATG GATAATGGCG GTAGTGTAGT GTACCTGCTA
GCTCCCAATG TGGGGTGA
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| Protein sequence | MRIAYANAMD FKTVIEALSK LIDEVTFTFT SSGLDVVAVD RAHISLIKLH FPKEAFEEFD
VEDQFRFGFN TQYMLKVMAS AKRKEKIEME SREESEIVIR MLGEPPREFT IRNIEVPIQE
LPELKLDFDV KAKITSGGFK KAVSEIATVS DSVEIDATEM EIKLRSKEST EIEVEFSKEM
GGLQEIEVKK PSVSSYPSDY LEDVLVLTRL SGFLNLLFSE QKPLQLEFNM DNGGSVVYLL
APNVG
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