Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2245 |
Symbol | |
ID | 5104306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2148350 |
End bp | 2148781 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640508138 |
Product | sirohydrochlorin cobaltochelatase |
Protein accession | YP_001192307 |
Protein GI | 146304991 |
COG category | [S] Function unknown |
COG ID | [COG2138] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.177211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00554027 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACGAG TATATAAACT CAGGGTTATG GTTATAGATA TGAAAATAGG AATTCTGCTT GTGCTTCATG GAAGTAGAGT AAATGAGTGG AAAGAGGTGG CAATAAATTA CAAGGACCTT CTCAAGAACT ATTTTGAATT AGTAGAGTTT GGATTTATAG AATTTAATCA ACCTACTCTC AGAGAGGCCG TTGAAGCCTT GGTTAAAATG GGAGCTACGG AAATAGTAGC GGTTCCACTT TTATTCGCAG CTGGAGCCCA TTTCTATAGG GACATTCCCA GACTAATTGG CATCGACGAA AACGGAAACG TGACGGTGAA TGAGAAAAGC GTGAAAGTAA TAATTGCTAG GCCCATAGGC ATTGATAAAA GGGTTGCTGA AGTACTAAAG GAAAGGGTAG AACAGGCTCT TGAAAGCCCT TGGCAGATTT GA
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Protein sequence | MTRVYKLRVM VIDMKIGILL VLHGSRVNEW KEVAINYKDL LKNYFELVEF GFIEFNQPTL REAVEALVKM GATEIVAVPL LFAAGAHFYR DIPRLIGIDE NGNVTVNEKS VKVIIARPIG IDKRVAEVLK ERVEQALESP WQI
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