| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2244 |
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| Symbol | |
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| ID | 5104305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2147682 |
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| End bp | 2148320 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640508137 |
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| Product | 30S ribosomal protein S6e |
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| Protein accession | YP_001192306 |
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| Protein GI | 146304990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2125] Ribosomal protein S6E (S10) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.587547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00206613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGGCTGACT TCAAGATTGT TATATCTGAT CCTGCATCAA AGAAGGTCGT TCCAGCTAAG
GTGAAGGTCA AGCTAGTTGA TAATGTACAA TCGGAAGAAG GGGAAAAAGA AGGACGCACT
TTACCAGTAT GTCTTGTCAA TCCGAAGACC AAAGAGAAGT TAGGGGCAGA TCAATTCATT
ACAGTTGAAA TACAAAAACA GGAAGGGGAC AAGAAGGTTA AGGTAAAAGT TCATTTCATT
GCTAGGGAAT CAGCTGAAGT TCCAGAAGGC GAGATTCATG CTAGTAAAGG ACTTACGGAG
AAATTTGGGG CAGAAGAGTT TGAAGCAGTA GCATACAGGA CTAAGTCTTT CCAGTTAAAT
GTGGATCAAG GACAGGTGAA TCTGGTCGGA TCCAAAATAG GCGACAATTT CACGCTGTCA
GTAGGAGGAA TAGCCCTTAA TCTCGCAATA ACGGGGGGAT CAGATAATAC TGGTTTCCCT
ATGAGACCCG ATGTTCAGGG GGCAGCTAAA CGAAGGATAC TTTTGGCTGG TCCACCAGGA
TTCATACCAA CAGAAGATGG GGAGAGAAGA AGGAAGATAG TGAGAGGAAA CGTTATCAGT
GCAGAAAATG TTCAGATTAA CTGTGTAATT GTAAGGTGA
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| Protein sequence | MADFKIVISD PASKKVVPAK VKVKLVDNVQ SEEGEKEGRT LPVCLVNPKT KEKLGADQFI
TVEIQKQEGD KKVKVKVHFI ARESAEVPEG EIHASKGLTE KFGAEEFEAV AYRTKSFQLN
VDQGQVNLVG SKIGDNFTLS VGGIALNLAI TGGSDNTGFP MRPDVQGAAK RRILLAGPPG
FIPTEDGERR RKIVRGNVIS AENVQINCVI VR
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