| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2242 |
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| Symbol | |
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| ID | 5104303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2146029 |
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| End bp | 2146451 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640508135 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001192304 |
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| Protein GI | 146304988 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.335681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00203626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGGACAG GTGGTTCTGT AGGAATTTTG GTCGACACTA ACATTCTCAT GTATGTATAT
GATAAAGTGG ATCCGTTTAA CAGGATAATA GAGTATTTTG AATATAAACC CATATTCTAT
ATTCATAAAC TTGTCTTACA GGAGCTAGAT ATACTAAGTA GGAAATATAA AAATTCCACG
AAGATGGAAT CAAGGATATC ATTAGCAAGG CAGTATCTAG AGGTCTATAG GAGTTGGTGG
AAATTAGTGG ATATTCACTC TAATCTCCCA ACGGACGAGG CTCTCATTGC CACAGCGAGA
GATCTAGGGT TAATCCTTTT TACCAACGAT GAGGAGCTAA GAAGGAAGGC TTTAGAGCAT
AACGTTGAAA TAATTTTCAT GGGAAGACAG GGTAAAATTA TAAAATCCTT TCGCACTATT
TAG
|
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| Protein sequence | MGTGGSVGIL VDTNILMYVY DKVDPFNRII EYFEYKPIFY IHKLVLQELD ILSRKYKNST
KMESRISLAR QYLEVYRSWW KLVDIHSNLP TDEALIATAR DLGLILFTND EELRRKALEH
NVEIIFMGRQ GKIIKSFRTI
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