| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2236 |
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| Symbol | |
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| ID | 5104297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2137531 |
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| End bp | 2141193 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640508129 |
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| Product | reverse gyrase |
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| Protein accession | YP_001192298 |
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| Protein GI | 146304982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1110] Reverse gyrase |
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| TIGRFAM ID | [TIGR01054] reverse gyrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.309719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000091621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCTG ATGAACGACT TCCAGACGTA GTGTATATGG GCTCTTGCCC CAATTGTGGT
TCTGACATAA CGTCAGTTCG CCTAGGGAAA GGGAGTGTAT GTGAAAGGTG TTTGGGAGAG
GAAATTGATA TAGGGAGTTT GCAACAACTG GTTGAAATAC TACAAAATGC AGGCACCATA
AAATCACTAT TGAGAGAGAA GAACATCCTT GAAGAGGAGA GAAAGGTAAT AGATCTATTC
AAACGCGTGA TTGGCTCAGA ACCGTTGGGC CCTCAGCGAT CTTGGATTAT TAGGGCACTC
CGAGGTGAGA GCTTTCCCAT AATTGCTCCT CCGGGACTTG GGAAAACTAC ATTTGGCATA
GTCATGTCAT TGTATTACGC CTCAAGGTCA GAGAAGTCTT TGATGATTTT TCCAACAAGG
ACTTTGGTTT CCCAAGTGGT CCAAAAGATT CAGGAAATGG GAAAGTCTCT GGACTTCACT
CCTAGATTAG TATATTACGT AAGTGGACTA ACCCAATCTA AAAAGGATGA ATTGAGTAAA
TCGTTGGCCG AGGAGGATTT TGATATTTTT ATCTCTACCT CACGTTACGT AATTCAGCAT
CTGGATGAGA TAAACAAGAT CAATTATAAG TATCTGTTTG TTGACGATGT TGATGCAGTT
CTAAAGTCGG GCAAGAGTTC GCTCACTATC CTGAAATTGA TGGGCTTCAG CGACGAAAAT
GTAACAAAGG TAAGGGAGTT ATTGAAGACA TCTAGAGATA ATACTTCATC ATTTGATGAG
ATAAGAAAAA TTCGAGAAAG ATTCGCCAAG GACAGGGTAG CTATATTTTC GTCTGCAACA
ATTACAAGAA GTAACCCGGT TTTCACTTCC CTAATGGGGT TCAAGCCCGG CGGTGCAACA
ATCTATCTCC GGAACGTTAT AGATTCATAT ATCATAGGAA CGGACATAGT GTCTCAAACA
GTCGAATTGG TAAAAAGATT AGGGCCTGGG GGCCTGGTCT TTGTCCCAGT GGATAAAGGC
TTAAACTTCG CCAGAGAAAT ATCTCAGAAG ATTGATTTCC TCAAGGCTTC TGTGGTTTCT
TCCAATACCA CCAAGAAATT AGAAGAATTC GAACAGGGCT CAATTGATGT ATTAATTGGG
GTAGCTACCC ATTATGGACT CCTAGTCAGG GGAATAGATA TTCCCTGGAG AGTTAGATAT
GCTATCTTCG CTGGGATACC TAAGTTCAGA TTCAAACTTG GAGAGACAAT GCATCCGCTG
GCTATGTTGA GAATACTTAC CCTACTTTCT GTTGTTCTTA AGGACCCTGA GATAACTAGG
ATCCTCAGAT TCGTGAAATA TAGACTAAGG AGGACCTCAA CTGCGGCTTT AGCCATGTTA
GCTAAGGCAG TTAAGGACGG AGCTTTAGAG GATAGAACCA TGATAAGGGC ATATGAGATA
GTAAATACTT ATCTGAAGGA CAAAAGGATT GTTGAGGCCA TATCCAAGTT TGGCGATATT
TCATTTTCCG GAGATTATAT TTCTATTCCA GATTATCTTA CCTATATACA AGCCAGCGGG
AGAACATCAA GACTTTATGG GGGACACCTA ACTACAGGCT TATCTGTTCT TCTTGTGGAT
GATATGATCC TCTTTGATCT CTTGAAAAAG AAGCTATCCT TTATTCTGGA TGACATGAAG
TGGAATCCCT TGGACCTAGA TAGTCAAAAA ATTGGAGATA GAGATCTTCA GGAAATAGTG
AAGCAGATAG ATAAGGAGAG GGCAGAGATC ATAAGAAGAA GGAAGATAGA GCCAATTTCC
ATGCCAATGG AGAAAATTAA GACCGTGTTA TTAATTGTTG AATCTCCGAA TAAGGCCAAA
ACTATTTCCA ATTTCTTTTC CAGGCCAAGT ATAAGGGATT TTGATGGATT ACGTGTATAT
GAAACTGTAA TTGGGGATAA GATATTGATG GTAACTTCAA GCGGTGGTCA TGTATATGAC
CTTACCACGA AGGATCTTGG AGTCTACGGA GTTGAAGTAA AAAGTAACGG GGATGTTAAT
GTTATTCCCT TCTATAACAC ATTGAAGCGA TGTGAAAATG GTCATCAATT CACCGAATAC
GCTGAGGGAG GTAAATGTCC AATCTGTATG TCAACTAACG TGAGAGATAA GAGATCGGCC
ATAAATGTTC TAAGAAGGCT AGTGCTTGAA GCCGACGAAG TTCTCATAGG AACAGATCCA
GATGTGGAAG GAGAGAAGAT TGCATGGGAT CTATACCTTA ACCTTAAGCC CTTCAACTCG
AATATATTTA GGGCCGAGTT TCATGAGGTG ACCAGAAGGG CCATAACTGA GGCGTTGAAC
TCGCCCAGAA CTTTCTCTAT CAACATGTTA CGTTCCCAGT TGGTCAGGAG AATAGAAGAC
AGGTGGATAG GTTTCAAATT GTCAAATAAA CTCAAAGAGG AATTTTGGAA AGAGTATTGT
ACCAAGACGT TGGGTAATAA GGACTGTGAT ACTGAGAATA GGAACCTCAG CGCAGGCAGG
GTTCAAACAC CCGTTTTAGG TTGGGTCATT TCCAGGTATG AGGAGTATCT CAGAACAAAG
AGGACAATGT ATGTGGCAAA GGCTGGTAAC CTTAACATTC TCATACCTAA GCAACAGGGT
ATAAGGAAAA ATTCCAAAAT AAAGATAGTA ATCCAATCAG CTGAGAGAAA ACAGGATACT
CTAGGTCCAT TTCCGGCCTA TACTACTGAT ACCTATTTAT CTGACGCTTC TGGGTTCTTC
TTCATTTCTG CCCAAGAGGC CATGCGTATA GCCCAAGATC TCTTCGAGAA CGGTCTCATA
ACATATCATA GAACAGACAG CACTAGGATA TCCAATGTAG GTATAGGTAT TGCTGAGTCC
TATCTCAAGG ATCTCTTGGG TGAAAGGTAT AGGGAGATAT TTGTACCCAG GAGTTGGGGA
GAGGGGGGAG CACATGAGGC GATAAGACCG ACAAGACCTT TAAACGGGGA ACAGTTGAGG
GCCATGGTAG AGCAAGGTGA AATAGAGCCA TCGAAACGCC TTACTTATAA CCATTACAGA
TTATATGACA TGATATTCAG GAGATTCCTA TCAAGCCAAC TTGTTCCACT AGTCGTAGAG
AAGGAAATAT TGCAGATATC CGCTAAAAAG GGTGATGAGA CTTTGAAATT AGAGAGTGAT
ACCCTTGAAA TTGTGACCAA TGTCAGACTT TCCAAGGATG TTCCAATTCC TTCCGAGATC
CTCTACATTC CTTTCAGATC TATTGGGGAA ACTCTCCTTA CACAAATTAA GGATAAACTT
CCAGCAGAAA TTGACGCAGT TATAACGAGC TCCTTCCAGA AAAGCGATCA TGCACTTTAT
ACTCAGGGTG AATTAGTATC CTTGATGAAG CAAAGAAAAA TTGGGAGACC CAGCACTTAC
GCATTTATTA TCTCTACTCT CCTAAAAAGA GGTTACGTCT TTGAGACCAT GAAGGTGAAG
AGACTGATAC CCTCTAAGTT AGGTCAGCAC GTTTATGAAT TCCTGAACTC TAGGTATTCT
AATTTCGTCT CAGAGGACAG AACAAGATCA CTCCTTGAAA GAATGGATCT CATTGAGGAA
GGGAAGGAGG ATTATAGGCA AGTATTAAAG CAATTGTACA ACGAAATACA GGACATAAGG
TGA
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| Protein sequence | MNADERLPDV VYMGSCPNCG SDITSVRLGK GSVCERCLGE EIDIGSLQQL VEILQNAGTI
KSLLREKNIL EEERKVIDLF KRVIGSEPLG PQRSWIIRAL RGESFPIIAP PGLGKTTFGI
VMSLYYASRS EKSLMIFPTR TLVSQVVQKI QEMGKSLDFT PRLVYYVSGL TQSKKDELSK
SLAEEDFDIF ISTSRYVIQH LDEINKINYK YLFVDDVDAV LKSGKSSLTI LKLMGFSDEN
VTKVRELLKT SRDNTSSFDE IRKIRERFAK DRVAIFSSAT ITRSNPVFTS LMGFKPGGAT
IYLRNVIDSY IIGTDIVSQT VELVKRLGPG GLVFVPVDKG LNFAREISQK IDFLKASVVS
SNTTKKLEEF EQGSIDVLIG VATHYGLLVR GIDIPWRVRY AIFAGIPKFR FKLGETMHPL
AMLRILTLLS VVLKDPEITR ILRFVKYRLR RTSTAALAML AKAVKDGALE DRTMIRAYEI
VNTYLKDKRI VEAISKFGDI SFSGDYISIP DYLTYIQASG RTSRLYGGHL TTGLSVLLVD
DMILFDLLKK KLSFILDDMK WNPLDLDSQK IGDRDLQEIV KQIDKERAEI IRRRKIEPIS
MPMEKIKTVL LIVESPNKAK TISNFFSRPS IRDFDGLRVY ETVIGDKILM VTSSGGHVYD
LTTKDLGVYG VEVKSNGDVN VIPFYNTLKR CENGHQFTEY AEGGKCPICM STNVRDKRSA
INVLRRLVLE ADEVLIGTDP DVEGEKIAWD LYLNLKPFNS NIFRAEFHEV TRRAITEALN
SPRTFSINML RSQLVRRIED RWIGFKLSNK LKEEFWKEYC TKTLGNKDCD TENRNLSAGR
VQTPVLGWVI SRYEEYLRTK RTMYVAKAGN LNILIPKQQG IRKNSKIKIV IQSAERKQDT
LGPFPAYTTD TYLSDASGFF FISAQEAMRI AQDLFENGLI TYHRTDSTRI SNVGIGIAES
YLKDLLGERY REIFVPRSWG EGGAHEAIRP TRPLNGEQLR AMVEQGEIEP SKRLTYNHYR
LYDMIFRRFL SSQLVPLVVE KEILQISAKK GDETLKLESD TLEIVTNVRL SKDVPIPSEI
LYIPFRSIGE TLLTQIKDKL PAEIDAVITS SFQKSDHALY TQGELVSLMK QRKIGRPSTY
AFIISTLLKR GYVFETMKVK RLIPSKLGQH VYEFLNSRYS NFVSEDRTRS LLERMDLIEE
GKEDYRQVLK QLYNEIQDIR
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