| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2233 |
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| Symbol | |
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| ID | 5104294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2135544 |
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| End bp | 2136290 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640508126 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001192295 |
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| Protein GI | 146304979 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000408105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATCAGG ATCTACTGGA CGATCTCCTA TCTAGGGTTA GCCGATTTGC ATCGATCTTG
GGCATCTCTA GAAGCGAATT GAAAATTTAC TCTACCCTTC TCCTTGAGGG ACAGAGTAGT
GCTAGGGACC TTTCAGATAA GTTAAATATT TCCTATACAA AGATTTACTC TATTTTAAAC
AGGCTCGAGG AGAGGGGTTG GATAAAAAAG GTAGGAAAGA GACCAGTTAG GTACGAGGCT
GTCTCACTAA GGGATCTATG GTCTAATATC AAGAAATTAC TTGAACTGAG GGTTTCTCAG
TTTGAAAGAG AGTTTATTGA ACCTCTCTCC ACTATGATAG ATTCCTCTTC GGCCTATACC
GTAGTCGTGG TTCCATCAGC CAATCTGAAG AAGACATTAA TCGACGTCCT CAACGAGCCC
AGCAAGCAGT ATCTGATAGC TATTTCATCT CAAGAACTGC TGGATGACGA GGTTTATCAG
ATAATTAATG GAAAATCCTT CACCTCCGAA GTAAGGGTTA TAATTCAAAG GGGGATTAAA
ATACCTGAAA AGGTAAGCAT CCAGCTAAAG GTCCTGGATA ATATGTTCGG GAGTGGGATA
GTTACCTCCT CATCGGTTTT GCTTGTGATC AAATCCCATG AAAGCTTGTC AGGTATAATT
TCCAATCACA GATATCTTGT GGACATAGCC CAGGTGTATT TCAACCATCT TTGGGAGCAG
GCTTCGCCTA TAGGCACAAA CCCTTAA
|
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| Protein sequence | MDQDLLDDLL SRVSRFASIL GISRSELKIY STLLLEGQSS ARDLSDKLNI SYTKIYSILN
RLEERGWIKK VGKRPVRYEA VSLRDLWSNI KKLLELRVSQ FEREFIEPLS TMIDSSSAYT
VVVVPSANLK KTLIDVLNEP SKQYLIAISS QELLDDEVYQ IINGKSFTSE VRVIIQRGIK
IPEKVSIQLK VLDNMFGSGI VTSSSVLLVI KSHESLSGII SNHRYLVDIA QVYFNHLWEQ
ASPIGTNP
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