Gene Msed_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2231 
Symbol 
ID5104292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2134487 
End bp2135248 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID640508124 
ProducttRNA (adenine-57, 58-N(1)-) methyltransferase 
Protein accessionYP_001192293 
Protein GI146304977 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000396256 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTAGTTT GGATAGACCC AAGGCGCGTT TACCTAGTAA AGCTAGAAAA GGGAAAGAAA 
CTTGATACCG ATAGGGGTTC ACTATCATTT GACAGTGTTA TAGGTAAAGA GTATGGAGAC
TACGTCGAGA TTAGTAAAGG AAAGGCATTT CTCATGTATC CCAGTTTAGA TTACATCTAT
GATGGGCTCC ATAGACCGTC TCAGGTCCTA TATCCTAAAG ATATAGGGTA CATGATTTTC
AAGTCGGGGA TAAAGCCTGG GGATACTGTG GTAGAGGCTG GTACTGGGTC CGGTTTCCTT
ACGATCTCGC TTTCACATTT CCTAGGAGCC AGCGGGAAAG TAATAACCTA TGATATAAGG
GAGGATATGC AAGAGCGTGC CAAGAAGAAC CTGGAGTTAG TGGGGCTCGT GGATAGGGTT
GTATTTAAAC TGGGAGATGT AAGGGAGAAA ATTGAGGAGA CTGGCGTAGA TGCCATTTTC
CTTGATATGC CAGATCCATG GTTAGCTGCA GAGAATGTTT ATAAAGCCCT TAAACCCTCT
GGCACCGTGG TGGTTTTTGT TCCCACAGTA AGTCAAATAG AGAAGACTTT TCTCTACTTG
AGAAAGAACG GCTTTGTGGA TGTAGAAGCT GTTGAACTTA TACTTAGAGA ATATCAAGTG
AAGGAGAACG CAACTCGGCC CAGGAGTATC GGGGTAACTC ACACTGGTTT TATCATAACA
GGTAGAAAAT CCATAAAAGG GAGTTCTGAA ATAGGTGAGT GA
 
Protein sequence
MVVWIDPRRV YLVKLEKGKK LDTDRGSLSF DSVIGKEYGD YVEISKGKAF LMYPSLDYIY 
DGLHRPSQVL YPKDIGYMIF KSGIKPGDTV VEAGTGSGFL TISLSHFLGA SGKVITYDIR
EDMQERAKKN LELVGLVDRV VFKLGDVREK IEETGVDAIF LDMPDPWLAA ENVYKALKPS
GTVVVFVPTV SQIEKTFLYL RKNGFVDVEA VELILREYQV KENATRPRSI GVTHTGFIIT
GRKSIKGSSE IGE