| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2226 |
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| Symbol | |
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| ID | 5104287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2131226 |
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| End bp | 2131786 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640508119 |
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| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
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| Protein accession | YP_001192288 |
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| Protein GI | 146304972 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000226618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAAGGAG AAATAAAGTT AGTAACAGGG AATAATTACA AGTTCATGGA ATTTCGGGAT
CTTGCCAAGG ATAAGATATC ACTGATCAAG GTTGATGCCC CTAAAATAGA GATACAGGCT
GATAGCTTGG AAGAGATAGT CCGATACTCG GCGGTAACAT TTTTCTCCCT TTTCAAGTCG
CCGTTGATAG TTGAGGATAG TGGATTGTTC GTTGAGGCTT TGAAGGGCTT TCCTGGTCCA
TACACAAACT ATGTAAAAAG GACACTCGAT TGTGAAGGGA TCCTCAAACT TATGGAAGGG
GAAAGTAATA GAAGAGCATT CTTCAAGTCC GTGATAGCAT ATATAGACCA GGAGAGATTG
GCCCTCTTTA AGGGAGAGAT ATTTGGTAAA ATAGCTGAGA ATGTGAGGGG GAATAAAGGA
TTTGGCTTCG ATCCGATATT CGTTCCAGAT GGATATGGGA TTACATTTGG AGAAATGGAG
CTAAGCGAGA AGAACGTCAT ATCCCATAGG GGCAGAGCCT TTTCAAACTT CTTGAAATAT
TATGAGAGTA TCCAGAACTA G
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| Protein sequence | MKGEIKLVTG NNYKFMEFRD LAKDKISLIK VDAPKIEIQA DSLEEIVRYS AVTFFSLFKS
PLIVEDSGLF VEALKGFPGP YTNYVKRTLD CEGILKLMEG ESNRRAFFKS VIAYIDQERL
ALFKGEIFGK IAENVRGNKG FGFDPIFVPD GYGITFGEME LSEKNVISHR GRAFSNFLKY
YESIQN
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