| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2225 |
|---|
| Symbol | |
|---|
| ID | 5104286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 2130613 |
|---|
| End bp | 2131260 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640508118 |
|---|
| Product | Mn2+-dependent serine/threonine protein kinase |
|---|
| Protein accession | YP_001192287 |
|---|
| Protein GI | 146304971 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3642] Mn2+-dependent serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000380991 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGAT TAACGCTTAT CAAGCGGGGC GCCGAGTCCT TAATTTATCA CGGCAGATTT
CTGGGCATAG AGGCAATATA CAAGGTGAGG GTCTCGAAGA GCTATAGACA TCCTCTTTTA
GACCGTAGGA TAAACATGGA GAGGACGATC TCAGAGGCAA AGATCATGCT ATCTGCCCTC
ACAAGTGGAG TTAATGTGCC TGCCCTCCTT TACGTTGATG TCGATAAATT CACAATAATC
ATGGAGTTTC TTGAAGGTAA GACCATAAAG GATGCCGTCA ACGTCAATGG ATTGGAAATA
TTCAAGGAAA TAGGGACAAT GACGGGAAAG ATGCACTTGA ATGAAATCAT ACACGGGGAT
CTTACCACAA ACAACATGAT ATTTCATGAC GATCAAGTAT TTTTCATTGA TTTCGGTTTA
TCTAAAAGAT CAAGGGAACT GGAAGATAAG GCTACTGAAG TTCACGTATT CCTCAGATCC
CTAGAGAGCG TACATCCTGA CATAAAAGAC CAAGCCTTCT CCCTCTTTCT TGAAGGATAT
GACGAGGTAA CTGGAATGGG GAAAGAGATA ATGGAAAAGG TGGAGGAAAT TAGAATGAGA
GGTAGATACG TGGATGAAAG GAGAAATAAA GTTAGTAACA GGGAATAA
|
|---|
| Protein sequence | MEGLTLIKRG AESLIYHGRF LGIEAIYKVR VSKSYRHPLL DRRINMERTI SEAKIMLSAL
TSGVNVPALL YVDVDKFTII MEFLEGKTIK DAVNVNGLEI FKEIGTMTGK MHLNEIIHGD
LTTNNMIFHD DQVFFIDFGL SKRSRELEDK ATEVHVFLRS LESVHPDIKD QAFSLFLEGY
DEVTGMGKEI MEKVEEIRMR GRYVDERRNK VSNRE
|
|---|
| |